Descubre y comparte nuestro conocimiento público

Se han encontrado 10 recursos

Resultados de búsqueda

Journal Article 2017

Autor: Cooper, L. Meier, A. Laporte, M-A. Elser, J.L. Mungall, C. Sinn, B.T. Cavaliere, D. Carbon, S. Dunn, N.A. Smith, B. Qu, B. Preece, J. Zhang, E. Todorovic, S. Gkouto, G. Doonan, J.H. Stevenson, D.W. Arnaud, Elizabeth Jaiswal, P.

The Planteome project (http://www.planteome.org) provides a suite of reference and species-specific ontologies for plants and annotations to genes and phenotypes. Ontologies serve as common standards for semantic integration of a large and growing corpus of plant genomics, phenomics and genetics ...

Enlace original: https://cgspace.cgiar.org/handle/10568/89498

Investigación en Agricultura
Enlace permanente

Cooper, L. ,  Meier, A. ,  Laporte, M-A. ,  Elser, J.L. ,  Mungall, C. ,  Sinn, B.T. ,  Cavaliere, D. ,  Carbon, S. ,  Dunn, N.A. ,  Smith, B. ,  Qu, B. ,  Preece, J. ,  Zhang, E. ,  Todorovic, S. ,  Gkouto, G. ,  Doonan, J.H. ,  Stevenson, D.W. ,  Arnaud, Elizabeth ,  Jaiswal, P. ,  [The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics] ,  The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics
Journal Article 2019

Autor: Selby, P. Abbeloos, R. Backlund, J.E. Guignon, V. Laporte, M-A. Rouard, M.

Modern genomic breeding methods rely heavily on very large amounts of phenotyping and genotyping data, presenting new challenges in effective data management and integration. Recently, the size and complexity of datasets have increased significantly, with the result that data is often stored on m...

Enlace original: https://cgspace.cgiar.org/handle/10568/103792

Investigación en Agricultura
Enlace permanente

Selby, P. ,  Abbeloos, R. ,  Backlund, J.E. ,  Guignon, V. ,  Laporte, M-A. ,  Rouard, M. ,  [BrAPI - an application programming interface for plant breeding applications] ,  BrAPI - an application programming interface for plant breeding applications
Journal Article 2019

Autor: Pommier, C. Michotey, C. Cornut, G. Roumet, P. Duchêne, E. Flores, R. Lebreton, A. Alaux, M. Durand, S. Kimmel, E. Letellier, T. Merceron, G. Laine, M. Guerche, C. Loaec, M. Steinbach, D. Laporte, M-A. Arnaud, Elizabeth Quesneville, H. Adam-Blondon, Anne-Françoise

GnpIS is a data repository for plant phenomics that stores whole field and greenhouse experimental data including environment measures. It allows long-term access to datasets following the FAIR principles: Findable, Accessible, Interoperable, and Reusable, by using a flexible and original approac...

Enlace original: https://cgspace.cgiar.org/handle/10568/101440

Investigación en Agricultura
Enlace permanente

Pommier, C. ,  Michotey, C. ,  Cornut, G. ,  Roumet, P. ,  Duchêne, E. ,  Flores, R. ,  Lebreton, A. ,  Alaux, M. ,  Durand, S. ,  Kimmel, E. ,  Letellier, T. ,  Merceron, G. ,  Laine, M. ,  Guerche, C. ,  Loaec, M. ,  Steinbach, D. ,  Laporte, M-A. ,  Arnaud, Elizabeth ,  Quesneville, H. ,  Adam-Blondon, Anne-Françoise ,  [Applying FAIR Principles to plant phenotypic data management in GnpIS] ,  Applying FAIR Principles to plant phenotypic data management in GnpIS
Conference Paper 2016

Autor: Valette, L. Pietragalla, J. Laporte, M-A. Afolabi, A. Boukar, O. Cannon, Steven B. Diers, D.W. Dreher, K.A. Gaur, Pooran M. Guerrero, A.F. Hash, C.T. Hualla, V. Inoussa, D. Kalberer, S.R. Kondombo-Barro, C.P. Kumar, S. López Montes, A. Menda, N. Nelson, R. Ofodile, S. Patil, S. Prasad, P. Rajendran, K. Rami, J.F. Rathore, A. Sackville Hamilton, N.R. Reinhard Simon, Guvener Selim Teme, N. Weltzien, Eva Arnaud, Elizabeth Shrestha, R.

The Crop Ontology (CO, http://www.cropontology.org/) is a resource of the Integrated Breeding Platform (IBP, http://integratedbreeding.net/) providing breeders with crop specific terms for fieldbook edition and data annotation. Until Mai 2015, a plant phenotype was annotated with 3 CO identifiers...

Enlace original: https://cgspace.cgiar.org/handle/10568/78758

Investigación en Agricultura
Enlace permanente
Valette, L. ,  Pietragalla, J. ,  Laporte, M-A. ,  Afolabi, A. ,  Boukar, O. ,  Cannon, Steven B. ,  Diers, D.W. ,  Dreher, K.A. ,  Gaur, Pooran M. ,  Guerrero, A.F. ,  Hash, C.T. ,  Hualla, V. ,  Inoussa, D. ,  Kalberer, S.R. ,  Kondombo-Barro, C.P. ,  Kumar, S. ,  López Montes, A. ,  Menda, N. ,  Nelson, R. ,  Ofodile, S. ,  Patil, S. ,  Prasad, P. ,  Rajendran, K. ,  Rami, J.F. ,  Rathore, A. ,  Sackville Hamilton, N.R. ,  Reinhard Simon, Guvener Selim ,  Teme, N. ,  Weltzien, Eva ,  Arnaud, Elizabeth ,  Shrestha, R. ,  [Crop ontology: integration of standard variables] ,  Crop ontology: integration of standard variables
Conference Paper 2016

Autor: Jonquet, C. Dzale-Yeumo, E. Arnaud, Elizabeth Larmande, Pierre Toulet, A. Laporte, M-A.

Our project is to develop and support a reference ontology repository for the agronomic domain. By reusing the NCBO BioPortal technology, we have already designed and implemented a prototype ontology repository for plants and a few crops. We plan to turn that prototype into a real service to the ...

Enlace original: https://cgspace.cgiar.org/handle/10568/78753

Investigación en Agricultura
Enlace permanente
Jonquet, C. ,  Dzale-Yeumo, E. ,  Arnaud, Elizabeth ,  Larmande, Pierre ,  Toulet, A. ,  Laporte, M-A. ,  [AgroPortal: a proposition for ontology-based services in the agronomic domain] ,  AgroPortal: a proposition for ontology-based services in the agronomic domain
Poster 2016

Autor: Valette, L. Pietragalla, J. Laporte, M-A. Afolabi, A. Boukar, O. Cannon, Steven B. Diers, D.W. Dreher, K.A. Gaur, Pooran M. Guerrero, A.F. Hash, C.T. Hualla, V. Inoussa, D. Kalberer, S.R. Kondombo-Barro, C.P. Kumar, S. López Montes, A. Menda, N. Nelson, R. Ofodile, S. Patil, S. Prasad, P. Rajendran, K. Rami, J.F. Rathore, A. Sackville Hamilton, N.R. Reinhard Simon, Guvener Selim Teme, N. Weltzien, Eva Arnaud, Elizabeth Shrestha, R.
Enlace original: https://cgspace.cgiar.org/handle/10568/78763

Investigación en Agricultura
Enlace permanente

Valette, L. ,  Pietragalla, J. ,  Laporte, M-A. ,  Afolabi, A. ,  Boukar, O. ,  Cannon, Steven B. ,  Diers, D.W. ,  Dreher, K.A. ,  Gaur, Pooran M. ,  Guerrero, A.F. ,  Hash, C.T. ,  Hualla, V. ,  Inoussa, D. ,  Kalberer, S.R. ,  Kondombo-Barro, C.P. ,  Kumar, S. ,  López Montes, A. ,  Menda, N. ,  Nelson, R. ,  Ofodile, S. ,  Patil, S. ,  Prasad, P. ,  Rajendran, K. ,  Rami, J.F. ,  Rathore, A. ,  Sackville Hamilton, N.R. ,  Reinhard Simon, Guvener Selim ,  Teme, N. ,  Weltzien, Eva ,  Arnaud, Elizabeth ,  Shrestha, R. ,  [Crop ontology: integration of standard variables] ,  Crop ontology: integration of standard variables
Poster 2016

Autor: Jonquet, C. Dzale-Yeumo, E. Arnaud, Elizabeth Larmande, Pierre Toulet, A. Laporte, M-A.
Enlace original: https://cgspace.cgiar.org/handle/10568/78752

Investigación en Agricultura
Enlace permanente

Jonquet, C. ,  Dzale-Yeumo, E. ,  Arnaud, Elizabeth ,  Larmande, Pierre ,  Toulet, A. ,  Laporte, M-A. ,  [AgroPortal: a proposition for ontology-based services in the agronomic domain] ,  AgroPortal: a proposition for ontology-based services in the agronomic domain
Conference Paper 2016

Autor: Jaiswal, P. Cooper, L. Elser, J.L. Meier, A. Laporte, M-A. Mungall, C. Smith, B. Johnson, E.K.S. Seymour, M. Preece, J. Xu, X. Kitchen, R.S. Qu, B. Zhang, E. Arnaud, Elizabeth Carbon, S. Todorovic, S. Stevenson, D.W.

Around the world, a small number of plant species serve as the primary source of food for the human population, yet these crops are vulnerable to multiple stressors, such as diseases, nutrient deficiencies and unfavorable environmental conditions. Traditional breeding methods for plant improvemen...

Enlace original: https://cgspace.cgiar.org/handle/10568/78564

Investigación en Agricultura
Enlace permanente
Jaiswal, P. ,  Cooper, L. ,  Elser, J.L. ,  Meier, A. ,  Laporte, M-A. ,  Mungall, C. ,  Smith, B. ,  Johnson, E.K.S. ,  Seymour, M. ,  Preece, J. ,  Xu, X. ,  Kitchen, R.S. ,  Qu, B. ,  Zhang, E. ,  Arnaud, Elizabeth ,  Carbon, S. ,  Todorovic, S. ,  Stevenson, D.W. ,  [Planteome: A resource for common reference ontologies and applications for plant biology] ,  Planteome: A resource for common reference ontologies and applications for plant biology
Conference Paper 2016

Autor: Arnaud, Elizabeth Valette, L. Pietragalla, J. Laporte, M-A. Aubert, C. Devare, Medha McLaren, G. Ribaut, J-M.

The Crop Ontology is a service of the Integrated Breeding Platform (www.integratedbreeding.net) in collaboration with the CGIAR and partners and under the leadership of Bioversity international. The Crop Ontology (www.cropontology.org) provides harmonized and validated breeders’ trait names, mea...

Enlace original: https://cgspace.cgiar.org/handle/10568/78612

Investigación en Agricultura
Enlace permanente
Arnaud, Elizabeth ,  Valette, L. ,  Pietragalla, J. ,  Laporte, M-A. ,  Aubert, C. ,  Devare, Medha ,  McLaren, G. ,  Ribaut, J-M. ,  [The Crop Ontology: a source of standard traits and variables for breeding and agronomy] ,  The Crop Ontology: a source of standard traits and variables for breeding and agronomy
Journal Article 2017

Autor: Dzale-Yeumo, E. Alaux, M. Arnaud, Elizabeth Aubin, S. Baumann, U. Buche, P. Cooper, L. Cwiek-Kupczynska, H. Davey, R.P. Fulss, R.A. Jonquet, C. Laporte, M-A. Larmande, Pierre Pommier, C. Protonotarios, V. Reverte, C. Shrestha, R. Subirats, I. Venkatesan, A. Whan, A. Quesneville, H.

In this article, we present a joint effort of the wheat research community, along with data and ontology experts, to develop wheat data interoperability guidelines. Interoperability is the ability of two or more systems and devices to cooperate and exchange data, and interpret that shared informa...

Enlace original: https://cgspace.cgiar.org/handle/10568/89854

Investigación en Agricultura
Enlace permanente

Dzale-Yeumo, E. ,  Alaux, M. ,  Arnaud, Elizabeth ,  Aubin, S. ,  Baumann, U. ,  Buche, P. ,  Cooper, L. ,  Cwiek-Kupczynska, H. ,  Davey, R.P. ,  Fulss, R.A. ,  Jonquet, C. ,  Laporte, M-A. ,  Larmande, Pierre ,  Pommier, C. ,  Protonotarios, V. ,  Reverte, C. ,  Shrestha, R. ,  Subirats, I. ,  Venkatesan, A. ,  Whan, A. ,  Quesneville, H. ,  [Developing data interoperability using standards: A wheat community use case] ,  Developing data interoperability using standards: A wheat community use case

Selecciona los documentos para visualizarlos

Nombre del archivo Ver recurso
Marcar todos
Limpiar todo