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Valette, L.Pietragalla, J.Laporte, M-A.Afolabi, A.Boukar, O.Cannon, Steven B.Diers, D.W.Dreher, K.A.Gaur, Pooran M.Guerrero, A.F.Hash, C.T.Hualla, V.Inoussa, D.Kalberer, S.R.Kondombo-Barro, C.P.Kumar, S.López Montes, A.Menda, N.Nelson, R.Ofodile, S.Patil, S.Prasad, P.Rajendran, K.Rami, J.F.Rathore, A.Sackville Hamilton, N.R.Reinhard Simon, Guvener SelimTeme, N.Weltzien, EvaArnaud, ElizabethShrestha, R.[Crop ontology: integration of standard variables]Crop ontology: integration of standard variables

Our project is to develop and support a reference ontology repository for the agronomic domain. By reusing the NCBO BioPortal technology, we have already designed and implemented a prototype ontology repository for plants and a few crops. We plan to turn that prototype into a real service to the ...


Jonquet, C.Dzale-Yeumo, E.Arnaud, ElizabethLarmande, PierreToulet, A.Laporte, M-A.[AgroPortal: a proposition for ontology-based services in the agronomic domain]AgroPortal: a proposition for ontology-based services in the agronomic domain

Valette, L.Pietragalla, J.Laporte, M-A.Afolabi, A.Boukar, O.Cannon, Steven B.Diers, D.W.Dreher, K.A.Gaur, Pooran M.Guerrero, A.F.Hash, C.T.Hualla, V.Inoussa, D.Kalberer, S.R.Kondombo-Barro, C.P.Kumar, S.López Montes, A.Menda, N.Nelson, R.Ofodile, S.Patil, S.Prasad, P.Rajendran, K.Rami, J.F.Rathore, A.Sackville Hamilton, N.R.Reinhard Simon, Guvener SelimTeme, N.Weltzien, EvaArnaud, ElizabethShrestha, R.[Crop ontology: integration of standard variables]Crop ontology: integration of standard variables

Jonquet, C.Dzale-Yeumo, E.Arnaud, ElizabethLarmande, PierreToulet, A.Laporte, M-A.[AgroPortal: a proposition for ontology-based services in the agronomic domain]AgroPortal: a proposition for ontology-based services in the agronomic domain

The central purpose of this workshop was to bring together users and developers of phenotype ontologies and to provide them with a forum to share, learn and debate. The second edition of the workshop further aimed to address two of the fundamental bottlenecks identified in the course of these com...


Matentzoglu, NBalhoff, J.P.Bello, S.M.Bradford, Y.M.Carmody, L.C.Cooper, L.D.Laporte, M-A.[Phenotype Ontologies Traversing All the Organisms (POTATO) workshop: 2nd edition.]Phenotype Ontologies Traversing All the Organisms (POTATO) workshop: 2nd edition.

Conte, M.G.Laporte, M-A.Aluome, C.Rouard, M.[GreenPhylDB v2.0: An improved database for plant functional genomics]GreenPhylDB v2.0: An improved database for plant functional genomics

Conte, M.G.Laporte, M-A.Perin, C.Rouard, M.[GreenPhylDB: A gene family database for plant functional genomics]GreenPhylDB: A gene family database for plant functional genomics

Scientific innovation is increasingly reliant on data and computational resources. Much of today’s life science research involves generating, processing, and reusing heterogeneous datasets that are growing exponentially in size. Demand for technical experts (data scientists and bioinformatici...


Etuk, A.Shaw, F.Gonzalez-Beltran, A.Johnson, D.Laporte, M-A.Rocca-Serra, P.Arnaud, ElizabethDevare, M.Kersey, P.J.Sansone, S-A.Davey, R.P.[COPO: a metadata platform for brokering FAIR data in the life sciences]COPO: a metadata platform for brokering FAIR data in the life sciences

Around the world, a small number of plant species serve as the primary source of food for the human population, yet these crops are vulnerable to multiple stressors, such as diseases, nutrient deficiencies and unfavorable environmental conditions. Traditional breeding methods for plant improvemen...


Jaiswal, P.Cooper, L.Elser, J.L.Meier, A.Laporte, M-A.Mungall, C.Smith, B.Johnson, E.K.S.Seymour, M.Preece, J.Xu, X.Kitchen, R.S.Qu, B.Zhang, E.Arnaud, ElizabethCarbon, S.Todorovic, S.Stevenson, D.W.[Planteome: A resource for common reference ontologies and applications for plant biology]Planteome: A resource for common reference ontologies and applications for plant biology

The Crop Ontology is a service of the Integrated Breeding Platform (www.integratedbreeding.net) in collaboration with the CGIAR and partners and under the leadership of Bioversity international. The Crop Ontology (www.cropontology.org) provides harmonized and validated breeders’ trait names, mea...


Arnaud, ElizabethValette, L.Pietragalla, J.Laporte, M-A.Aubert, C.Devare, MedhaMcLaren, G.Ribaut, J-M.[The Crop Ontology: a source of standard traits and variables for breeding and agronomy]The Crop Ontology: a source of standard traits and variables for breeding and agronomy

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