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Crop wild relatives are valuable resources for future genetic improvement. Here, we report the de novo genome assembly of Musa itinerans, a disease-resistant wild banana relative in subtropical China. The assembled genome size was 462.1 Mb, covering 75.2% of the genome (615.2Mb) and containing 32...


Wu, W.Yang, Y.L.He, W.M.Rouard, M.Li, W.M.Xu, M.Roux, N.Ge, X.J.[Whole genome sequencing of a banana wild relative Musa itinerans provides insights into lineage-specific diversification of the Musa genus]Whole genome sequencing of a banana wild relative Musa itinerans provides insights into lineage-specific diversification of the Musa genus

The study of gene families is an important field of comparative genomics, allowing, by the analysis of evolutionary history, to identify homology relationships, gene losses and to help in annotation transfers. The addition of metabolic information improves the identification of candidate genes by...


Larivière, D.Couvin, D.Droc, GaëtanLorenzo, G.Guignon, V.Rouard, M.Lyons, E.This, D.Bocs, S.Dufayard, Jean-François[Comparative genomics of gene families in relation with metabolic pathways for gene candidates highlighting]Comparative genomics of gene families in relation with metabolic pathways for gene candidates highlighting
Baurens, F.C.Martin, G.Hervouet, C.Njembele, J.C.Habas, R.Salmon, F.Ricci, S.Rouard, M.Yahiaoui, N.D'Hont, A.[Mosaic genome structure and chromosome segregation in polyploid interspecific plantain bananas and derived breeding accessions]Mosaic genome structure and chromosome segregation in polyploid interspecific plantain bananas and derived breeding accessions

Banana is a fruit crop with a complex diversity pattern resulting from a complex domestication scheme. Due to the availability of plant genome sequences and to the accessibility of next-generation genotyping technologies, Genome-Wide Association Studies (GWAS) have been increasingly performed in ...


Sardos, J.Rouard, M.Hueber, Y.Cenci, A.Hyma, K.Houwe, I. van denHribova, E.Courtois, BrigitteRoux, N.[One hundred and six diploids to unravel the genetics of traits in banana: a panel for genome-wide association study and its application to the seedless phenotype]One hundred and six diploids to unravel the genetics of traits in banana: a panel for genome-wide association study and its application to the seedless phenotype

Hueber, Y.Hribova, E.Houwe, I. van denRoux, N.Rouard, M.Sardos, J.[Application of NGS-generated SNP data to complex crops studies: the example of Musa spp. (banana).]Application of NGS-generated SNP data to complex crops studies: the example of Musa spp. (banana).

Recent advances in genomics indicate functional significance of a majority of genome sequences and their long range interactions. As a detailed examination of genome organization and function requires very high quality genome sequence, the objective of this study was to improve reference genome a...


Martin, G.Baurens, F.C.Droc, GaëtanRouard, M.Cenci, A.Kilian, A.Hastie, A.Doležel, JaroslavAury, J.M.Alberti, A.Carreel, F.D'Hont, A.[Improvement of the banana “Musa acuminata” reference sequence using NGS data and semi-automated bioinformatics methods]Improvement of the banana “Musa acuminata” reference sequence using NGS data and semi-automated bioinformatics methods

Banana (Musa sp.) is a vegetatively propagated, low fertility, potentially hybrid and polyploid crop. These qualities make the breeding and targeted genetic improvement of this crop a difficult and long process. The Genome-Wide Association Study (GWAS) approach is becoming widely used in crop pla...


Sardos, J.Rouard, M.Hueber, Y.Cenci, A.Hyma, K.E.Houwe, I. van denHribova, E.Courtois, Brigitte[A genome-wide association study on the seedless phenotype in banana (Musa spp.) reveals the potential of a selected panel to detect candidate genes in a vegetatively propagated crop]A genome-wide association study on the seedless phenotype in banana (Musa spp.) reveals the potential of a selected panel to detect candidate genes in a vegetatively propagated crop

Guignon, V.Droc, GaëtanRouard, M.Baurens, F.C.Ruiz, M.Roux, N.Sidibe-Bocs, S.[A community annotation system for Musa genomes]A community annotation system for Musa genomes

Conte, M.G.Laporte, M-A.Aluome, C.Rouard, M.[GreenPhylDB v2.0: An improved database for plant functional genomics]GreenPhylDB v2.0: An improved database for plant functional genomics

Cenci, A.Zorrilla-Fontanesi, J.Kissel, E.Hueber, Y.Dubois, E.Parrinello, H.Swennen, R.L.Roux, N.Rouard, M.Carpentier, S.[Transcriptomic analysis in banana cultivars during an early stage of drought-stress]Transcriptomic analysis in banana cultivars during an early stage of drought-stress

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