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Simon, R.Córdova, R.Hualla, V.Tejada, S.Flores, M.Salas, E.Bonierbale, Merideth W.[High volume data and their integration in a clonal plant breeding program.]High volume data and their integration in a clonal plant breeding program.

The potato ontology is being developed as part of the crop ontology (CO) effort amongst CGIAR centers. The CO serves primarily to harmonize phenotypic and genotypic data for semantic compatibility across diverse, distributed data types; and ontology in general, facilitates the use of terms by bot...


Simon, R.Bonierbale, Merideth W.[Status of the draft potato ontology.]Status of the draft potato ontology.

Conserved ortholog set (COS) markers are useful for genetic mapping across diverse taxa, including the Solanaceae. We amplified over 300 COS markers from diverse set of Solanum germplasm, sequenced them and aligned into the whole genome sequence of potato. We also mapped a set of COS markers gene...


Lindqvist-Kreuze, HanelePortal, L.Rodríguez, F.Simon, R.Mueller, L.Spooner, D.Bonierbale, Merideth W.[In silico mapping of Conserved Ortholog Set (COS) markers in the potato genome.]In silico mapping of Conserved Ortholog Set (COS) markers in the potato genome.
Arnaud, ElizabethShrestha, R.Kulakow, P.A.Bakare, M.López Montes, A.Ofodile, S.Reddy T.P.Prasad, P.Shah, TushaarHash, C.T.Weltzien, EvaSissoko, I.Guerrero, A.F.Simon, R.Borja Borja, N.F.Ramil, M.Matteis, L.Skofic, M.Hazekamp, T.McLaren, G.Cooper, L.Jaiswal, P.Menda, N.Nelson, R.Grant, D.Bastow, R.Mueller, L.Rami, J.F.[The species-specific crop ontology (Generation Challenge Programme): Application and integration into the reference plant trait ontology to enable data mining on phenotypes.]The species-specific crop ontology (Generation Challenge Programme): Application and integration into the reference plant trait ontology to enable data mining on phenotypes.

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