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Artificial miRNAs (amiRNA) were generated targeting conserved sequences within the genomes of the two causal agents of Cassava brown streak disease (CBSD): Cassava brown streak virus (CBSV) and Ugandan cassava brown streak virus (UCBSV). Transient expression studies on ten amiRNAs targeting 21 nt...


Wagaba, HenryPatil, Basavaprabhu L.Mukasa, SettumbaAlicai, TitusFauquet, Claude M.Taylor, Nigel J.[Artificial microRNA-derived resistance to Cassava brown streak disease]Artificial microRNA-derived resistance to Cassava brown streak disease

We examine variation in mutation dynamics across a single genome (Zea mays ssp. mays) in relation to regional and flanking base composition using a data set of 10,472 SNPs generated by resequencing 1776 transcribed regions. We report several relationships between flanking base composition and mut...


Morton, B.Vroh Bi, IrieMcMullen, M.Gaut, B.[Variation in mutation dynamics across the maize genome as a function of regional and flanking base composition.]Variation in mutation dynamics across the maize genome as a function of regional and flanking base composition.

The responses of 19 East African highland (EAH) banana cultivars (AAA and AA genomes) and two reference cultivars to black sigatoka (Mycosphaerella fijiensis Morelet) and Cladosporium leaf speckle (Cladosporium musae Mason) were studied in 1993 at Onne (southeastern Nigeria) under ecological cond...


Pasberg-Gauhl, C.Gauhl, F.[Response of East African highland bananas to black Sigatoka and Cladosporium leaf speckle under tropical humid forest lowland conditions in West Africa]Response of East African highland bananas to black Sigatoka and Cladosporium leaf speckle under tropical humid forest lowland conditions in West Africa

Sharma, S.K.Bolser, D.Boer, J. de.Sonderkaer, M.Amoros, W.Carboni, M.F.D'Ambrosio, J.M.Cruz, G. de laGenova, A. diDouches, D.S.Eguiluz, M.Guo, X.Guzmán, F.Hackett, C.A.Hamilton, J.P.Li, G.Li, Y.Lozano, R.Maass, A.Marshall, D.Martínez, D.McLean, K.Mejia, N.Milne, L.Munive, S.Nagy, I.Ponce, O.Ramírez, M.Simon, R.Thomson, S.J.Torres, Y.Waugh, R.Zhang, Z.Huang, S.Visser, Richard G.F.Bachem, C.W.B.Sagredo, B.Feingold, S.E.Orjeda, G.Veilleux, R.E.Bonierbale, Merideth W.Jacobs, J.M.E.Milbourne, D.Martin, D.M.A.Bryan, G.J.[Construction of reference chromosome-scale pseudomolecules for potato: Integrating the potato genome with genetic and physical maps.]Construction of reference chromosome-scale pseudomolecules for potato: Integrating the potato genome with genetic and physical maps.

Admixture and polyploidization are major recognized eukaryotic genome evolutionary processes. Their impacts on genome dynamics vary among systems and are still partially deciphered. Many banana cultivars are triploid (sometimes diploid) interspecific hybrids between Musa acuminata (A genome) and ...


Baurens, F.C.Martin, G.Hervouet, C.Salmon, F.Yohoume D.Ricci, S.Rouard, M.Habas, R.Yahiaoui, N.D’Hont, A.[Recombinations and large structural variations shape the mosaic genomes of interspecific edible bananas]Recombinations and large structural variations shape the mosaic genomes of interspecific edible bananas
Souza, J. deFuentes, S.Savenkov, E.I.Cuéllar, Wilmer J.Kreuze, J.F.[The complete nucleotide sequence of sweet potato C6 virus : a carlavirus lacking a cysteine-rich protein]The complete nucleotide sequence of sweet potato C6 virus : a carlavirus lacking a cysteine-rich protein

The publication of the first draft chicken sequence assembly became available in 2004 and was updated in 2006. However, this does not constitute a definitive and complete sequence of the chicken genome, since the microchromosomes are notably under-represented. In an effort to develop maps for the...


Douaud, M.Feve, K.Gerus, M.Fillon, V.Bardes, S.Gourichon, D.Dawson, D.A.Hanotte, Olivier H.Burke, T.Vignoles, F.Morrison, M.Tixier-Boichard, M.Vignal, A.Pitel, F.[Addition of the microchromosome GGA25 to the chicken genome sequence assembly through radiation hybrid and genetic mapping]Addition of the microchromosome GGA25 to the chicken genome sequence assembly through radiation hybrid and genetic mapping
Aritua, ValentineHarrison, JamesSapp, MelanieBuruchara, Robin A.Smith, JulianStudholme, David J.[Genome sequencing reveals a new lineage associated with lablab bean and genetic exchange between Xanthomonas axonopodis pv. phaseoli and Xanthomonas fuscans subsp. fuscans]Genome sequencing reveals a new lineage associated with lablab bean and genetic exchange between Xanthomonas axonopodis pv. phaseoli and Xanthomonas fuscans subsp. fuscans
Yoshida, S.Kim, S.Wafula, E.K.Tanskanen, J.Kim, Y.M.Honaas, L.Yang, ZSpallek, T.Conn, C.E.Ichihashi, Y.Cheong, K.Cui, S.Der, J.P.Gundlach, H.Jiao, Y.Hori, C.Ishida, J.K.Kasahara, HKiba, T.Kim, M.S.Koo, N.Laohavisit, A.Lee, Y.H.Lumba, S.McCourt, P.Mortimer, J.C.Mutuku, Josiah M.Nomura, T.Sasaki-Sekimoto, Y.Seto, Y.Wang, Y.Wakatake, T.Sakakibara, H.Demura, T.Yamaguchi, S.Yoneyama, K.Manabe, R.I.Nelson, D.C.Schulman, A.H.Timko, M.P.dePamphilis, C.W.Choi, D.Shirasu, K.[Genome sequence of striga asiatica provides insight into the evolution of plant parasitism]Genome sequence of striga asiatica provides insight into the evolution of plant parasitism
Mitra, S.D.Ganaie, F.Bankar, K.Velu, D.Mani, B.Vasudevan, M.Shome, R.Rahman, HabiburGhosh, S.K.Shome, B.R.[Genome-wide analysis of mammary gland shows modulation of transcriptome landscape with alternative splice variants in Staphylococcus aureus mastitis in mice]Genome-wide analysis of mammary gland shows modulation of transcriptome landscape with alternative splice variants in Staphylococcus aureus mastitis in mice

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