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Report 2016

Autor: Arnaud, Elizabeth Castañeda-Álvarez, Nora P. Ganglo Cossi, J. Endresen, D. Jahanshiri, E. Vigouroux, Yves

Human wellbeing and food security in a changing climate depend on productive and sustainable agriculture. For this, policies based on analyses and research results are vital to establish conservation priorities of natural resources that underpin the enhancement of sustainable food production. ...

Enlace original: https://cgspace.cgiar.org/handle/10568/77851

Investigación en Agricultura
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Arnaud, Elizabeth ,  Castañeda-Álvarez, Nora P. ,  Ganglo Cossi, J. ,  Endresen, D. ,  Jahanshiri, E. ,  Vigouroux, Yves ,  [Final report of the Task Group on GBIF Data Fitness for Use in Agrobiodiversity] ,  Final report of the Task Group on GBIF Data Fitness for Use in Agrobiodiversity
Journal Article 2017

Autor: Jonquet, C. Toulet, A. Arnaud, Elizabeth Aubin, S. Dzale-Yeumo, E. Emonet, V. Graybeal, J. Laporte, M-A. Musen, M.A. Pesce, V. Larmande, Pierre

Many vocabularies and ontologies are produced to represent and annotate agronomic data. However, those ontologies are spread out, in different formats, of different size, with different structures and from overlapping domains. Therefore, there is need for a common platform to receive and host the...

Enlace original: https://cgspace.cgiar.org/handle/10568/89904

Investigación en Agricultura
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Jonquet, C. ,  Toulet, A. ,  Arnaud, Elizabeth ,  Aubin, S. ,  Dzale-Yeumo, E. ,  Emonet, V. ,  Graybeal, J. ,  Laporte, M-A. ,  Musen, M.A. ,  Pesce, V. ,  Larmande, Pierre ,  [AgroPortal: a vocabulary and ontology repository for agronomy] ,  AgroPortal: a vocabulary and ontology repository for agronomy
Poster 2008

Autor: Arnaud, Elizabeth Mackay, M. Endresen, T.F.D. Dias, S. Sood, R. Viparthi, K. Skofic, M. Alercia, A. Franco, T. Atieno, F.
Enlace original: https://cgspace.cgiar.org/handle/10568/67507

Investigación en Agricultura
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Arnaud, Elizabeth ,  Mackay, M. ,  Endresen, T.F.D. ,  Dias, S. ,  Sood, R. ,  Viparthi, K. ,  Skofic, M. ,  Alercia, A. ,  Franco, T. ,  Atieno, F. ,  [A global information system for the conservation and sustainable use of Plant Genetic Resources for Food and Agriculture (PGRFA)] ,  A global information system for the conservation and sustainable use of Plant Genetic Resources for Food and Agriculture (PGRFA)
Poster 2011

Autor: Kulakow, P.A. Bakare, M.A. Shrestha, R. Arnaud, Elizabeth
Enlace original: https://cgspace.cgiar.org/handle/10568/67513

Investigación en Agricultura
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Kulakow, P.A. ,  Bakare, M.A. ,  Shrestha, R. ,  Arnaud, Elizabeth ,  [Expansion of the crop ontology by adding cassava trait ontology] ,  Expansion of the crop ontology by adding cassava trait ontology
Journal Article 2019

Autor: Pommier, C. Michotey, C. Cornut, G. Roumet, P. Duchêne, E. Flores, R. Lebreton, A. Alaux, M. Durand, S. Kimmel, E. Letellier, T. Merceron, G. Laine, M. Guerche, C. Loaec, M. Steinbach, D. Laporte, M-A. Arnaud, Elizabeth Quesneville, H. Adam-Blondon, Anne-Françoise

GnpIS is a data repository for plant phenomics that stores whole field and greenhouse experimental data including environment measures. It allows long-term access to datasets following the FAIR principles: Findable, Accessible, Interoperable, and Reusable, by using a flexible and original approac...

Enlace original: https://cgspace.cgiar.org/handle/10568/101440

Investigación en Agricultura
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Pommier, C. ,  Michotey, C. ,  Cornut, G. ,  Roumet, P. ,  Duchêne, E. ,  Flores, R. ,  Lebreton, A. ,  Alaux, M. ,  Durand, S. ,  Kimmel, E. ,  Letellier, T. ,  Merceron, G. ,  Laine, M. ,  Guerche, C. ,  Loaec, M. ,  Steinbach, D. ,  Laporte, M-A. ,  Arnaud, Elizabeth ,  Quesneville, H. ,  Adam-Blondon, Anne-Françoise ,  [Applying FAIR Principles to plant phenotypic data management in GnpIS] ,  Applying FAIR Principles to plant phenotypic data management in GnpIS
Conference Paper 2016

Autor: Valette, L. Pietragalla, J. Laporte, M-A. Afolabi, A. Boukar, O. Cannon, Steven B. Diers, D.W. Dreher, K.A. Gaur, Pooran M. Guerrero, A.F. Hash, C.T. Hualla, V. Inoussa, D. Kalberer, S.R. Kondombo-Barro, C.P. Kumar, S. López Montes, A. Menda, N. Nelson, R. Ofodile, S. Patil, S. Prasad, P. Rajendran, K. Rami, J.F. Rathore, A. Sackville Hamilton, N.R. Reinhard Simon, Guvener Selim Teme, N. Weltzien, Eva Arnaud, Elizabeth Shrestha, R.

The Crop Ontology (CO, http://www.cropontology.org/) is a resource of the Integrated Breeding Platform (IBP, http://integratedbreeding.net/) providing breeders with crop specific terms for fieldbook edition and data annotation. Until Mai 2015, a plant phenotype was annotated with 3 CO identifiers...

Enlace original: https://cgspace.cgiar.org/handle/10568/78758

Investigación en Agricultura
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Valette, L. ,  Pietragalla, J. ,  Laporte, M-A. ,  Afolabi, A. ,  Boukar, O. ,  Cannon, Steven B. ,  Diers, D.W. ,  Dreher, K.A. ,  Gaur, Pooran M. ,  Guerrero, A.F. ,  Hash, C.T. ,  Hualla, V. ,  Inoussa, D. ,  Kalberer, S.R. ,  Kondombo-Barro, C.P. ,  Kumar, S. ,  López Montes, A. ,  Menda, N. ,  Nelson, R. ,  Ofodile, S. ,  Patil, S. ,  Prasad, P. ,  Rajendran, K. ,  Rami, J.F. ,  Rathore, A. ,  Sackville Hamilton, N.R. ,  Reinhard Simon, Guvener Selim ,  Teme, N. ,  Weltzien, Eva ,  Arnaud, Elizabeth ,  Shrestha, R. ,  [Crop ontology: integration of standard variables] ,  Crop ontology: integration of standard variables
Conference Paper 2016

Autor: Jonquet, C. Dzale-Yeumo, E. Arnaud, Elizabeth Larmande, Pierre Toulet, A. Laporte, M-A.

Our project is to develop and support a reference ontology repository for the agronomic domain. By reusing the NCBO BioPortal technology, we have already designed and implemented a prototype ontology repository for plants and a few crops. We plan to turn that prototype into a real service to the ...

Enlace original: https://cgspace.cgiar.org/handle/10568/78753

Investigación en Agricultura
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Jonquet, C. ,  Dzale-Yeumo, E. ,  Arnaud, Elizabeth ,  Larmande, Pierre ,  Toulet, A. ,  Laporte, M-A. ,  [AgroPortal: a proposition for ontology-based services in the agronomic domain] ,  AgroPortal: a proposition for ontology-based services in the agronomic domain
Poster 2016

Autor: Valette, L. Pietragalla, J. Laporte, M-A. Afolabi, A. Boukar, O. Cannon, Steven B. Diers, D.W. Dreher, K.A. Gaur, Pooran M. Guerrero, A.F. Hash, C.T. Hualla, V. Inoussa, D. Kalberer, S.R. Kondombo-Barro, C.P. Kumar, S. López Montes, A. Menda, N. Nelson, R. Ofodile, S. Patil, S. Prasad, P. Rajendran, K. Rami, J.F. Rathore, A. Sackville Hamilton, N.R. Reinhard Simon, Guvener Selim Teme, N. Weltzien, Eva Arnaud, Elizabeth Shrestha, R.
Enlace original: https://cgspace.cgiar.org/handle/10568/78763

Investigación en Agricultura
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Valette, L. ,  Pietragalla, J. ,  Laporte, M-A. ,  Afolabi, A. ,  Boukar, O. ,  Cannon, Steven B. ,  Diers, D.W. ,  Dreher, K.A. ,  Gaur, Pooran M. ,  Guerrero, A.F. ,  Hash, C.T. ,  Hualla, V. ,  Inoussa, D. ,  Kalberer, S.R. ,  Kondombo-Barro, C.P. ,  Kumar, S. ,  López Montes, A. ,  Menda, N. ,  Nelson, R. ,  Ofodile, S. ,  Patil, S. ,  Prasad, P. ,  Rajendran, K. ,  Rami, J.F. ,  Rathore, A. ,  Sackville Hamilton, N.R. ,  Reinhard Simon, Guvener Selim ,  Teme, N. ,  Weltzien, Eva ,  Arnaud, Elizabeth ,  Shrestha, R. ,  [Crop ontology: integration of standard variables] ,  Crop ontology: integration of standard variables
Poster 2016

Autor: Jonquet, C. Dzale-Yeumo, E. Arnaud, Elizabeth Larmande, Pierre Toulet, A. Laporte, M-A.
Enlace original: https://cgspace.cgiar.org/handle/10568/78752

Investigación en Agricultura
Enlace permanente

Jonquet, C. ,  Dzale-Yeumo, E. ,  Arnaud, Elizabeth ,  Larmande, Pierre ,  Toulet, A. ,  Laporte, M-A. ,  [AgroPortal: a proposition for ontology-based services in the agronomic domain] ,  AgroPortal: a proposition for ontology-based services in the agronomic domain
Journal Article 2016

Autor: Cwiek-Kupczynska, H. Altmann, T. Arend, D. Arnaud, Elizabeth Chen, D. Cornut, G. Fiorani, F. Frohmberg, W. Junker, A. Klukas, C. Lange, M. Mazurek, C. Nafissi, A. Neveu, P. Oeveren, J. van Pommier, C. Poorter, H. Rocca-Serra, P. Sansone, S. Scholz, U. Schriek, M. van Seren, U. Usadel, B. Weise, S.F. Kersey, P. Krajewski, P.

Plant phenotypic data shrouds a wealth of information which, when accurately analysed and linked to other data types, brings to light the knowledge about the mechanisms of life. As phenotyping is a field of research comprising manifold, diverse and time-consuming experiments, the findings can be ...

Enlace original: https://cgspace.cgiar.org/handle/10568/77807

Investigación en Agricultura
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Cwiek-Kupczynska, H. ,  Altmann, T. ,  Arend, D. ,  Arnaud, Elizabeth ,  Chen, D. ,  Cornut, G. ,  Fiorani, F. ,  Frohmberg, W. ,  Junker, A. ,  Klukas, C. ,  Lange, M. ,  Mazurek, C. ,  Nafissi, A. ,  Neveu, P. ,  Oeveren, J. van ,  Pommier, C. ,  Poorter, H. ,  Rocca-Serra, P. ,  Sansone, S. ,  Scholz, U. ,  Schriek, M. van ,  Seren, U. ,  Usadel, B. ,  Weise, S.F. ,  Kersey, P. ,  Krajewski, P. ,  [Measures for interoperability of phenotypic data: minimum information requirements and formatting] ,  Measures for interoperability of phenotypic data: minimum information requirements and formatting

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