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Plant phenotypic data shrouds a wealth of information which, when accurately analysed and linked to other data types, brings to light the knowledge about the mechanisms of life. As phenotyping is a field of research comprising manifold, diverse and time-consuming experiments, the findings can be ...


Cwiek-Kupczynska, H.Altmann, T.Arend, D.Arnaud, ElizabethChen, D.Cornut, G.Fiorani, F.Frohmberg, W.Junker, A.Klukas, C.Lange, M.Mazurek, C.Nafissi, A.Neveu, P.Oeveren, J. vanPommier, C.Poorter, H.Rocca-Serra, P.Sansone, S.Scholz, U.Schriek, M. vanSeren, U.Usadel, B.Weise, S.F.Kersey, P.Krajewski, P.[Measures for interoperability of phenotypic data: minimum information requirements and formatting]Measures for interoperability of phenotypic data: minimum information requirements and formatting

Around the world, a small number of plant species serve as the primary source of food for the human population, yet these crops are vulnerable to multiple stressors, such as diseases, nutrient deficiencies and unfavorable environmental conditions. Traditional breeding methods for plant improvemen...


Jaiswal, P.Cooper, L.Elser, J.L.Meier, A.Laporte, M-A.Mungall, C.Smith, B.Johnson, E.K.S.Seymour, M.Preece, J.Xu, X.Kitchen, R.S.Qu, B.Zhang, E.Arnaud, ElizabethCarbon, S.Todorovic, S.Stevenson, D.W.[Planteome: A resource for common reference ontologies and applications for plant biology]Planteome: A resource for common reference ontologies and applications for plant biology

The Crop Ontology is a service of the Integrated Breeding Platform (www.integratedbreeding.net) in collaboration with the CGIAR and partners and under the leadership of Bioversity international. The Crop Ontology (www.cropontology.org) provides harmonized and validated breeders’ trait names, mea...


Arnaud, ElizabethValette, L.Pietragalla, J.Laporte, M-A.Aubert, C.Devare, MedhaMcLaren, G.Ribaut, J-M.[The Crop Ontology: a source of standard traits and variables for breeding and agronomy]The Crop Ontology: a source of standard traits and variables for breeding and agronomy

In this article, we present a joint effort of the wheat research community, along with data and ontology experts, to develop wheat data interoperability guidelines. Interoperability is the ability of two or more systems and devices to cooperate and exchange data, and interpret that shared informa...


Dzale-Yeumo, E.Alaux, M.Arnaud, ElizabethAubin, S.Baumann, U.Buche, P.Cooper, L.Cwiek-Kupczynska, H.Davey, R.P.Fulss, R.A.Jonquet, C.Laporte, M-A.Larmande, PierrePommier, C.Protonotarios, V.Reverte, C.Shrestha, R.Subirats, I.Venkatesan, A.Whan, A.Quesneville, H.[Developing data interoperability using standards: A wheat community use case]Developing data interoperability using standards: A wheat community use case

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