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Journal Article 2017

Autor: Jonquet, C. Toulet, A. Arnaud, Elizabeth Aubin, S. Dzale-Yeumo, E. Emonet, V. Graybeal, J. Laporte, M-A. Musen, M.A. Pesce, V. Larmande, Pierre

Many vocabularies and ontologies are produced to represent and annotate agronomic data. However, those ontologies are spread out, in different formats, of different size, with different structures and from overlapping domains. Therefore, there is need for a common platform to receive and host the...

Enlace original: https://cgspace.cgiar.org/handle/10568/89904

Investigación en Agricultura
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Jonquet, C. ,  Toulet, A. ,  Arnaud, Elizabeth ,  Aubin, S. ,  Dzale-Yeumo, E. ,  Emonet, V. ,  Graybeal, J. ,  Laporte, M-A. ,  Musen, M.A. ,  Pesce, V. ,  Larmande, Pierre ,  [AgroPortal: a vocabulary and ontology repository for agronomy] ,  AgroPortal: a vocabulary and ontology repository for agronomy
Conference Paper 2013

Autor: Matteis L Chibon P Espinosa, H. Skofic M Finkers R Bruskiewich, R. Hyman, Glenn Arnaud, Elizabeth

A recurrent issue for data integration is the lack of a common and structured vocabulary used by different parties to describe their data sets. The Crop Ontology (www.cropontology.org) project aims to provide a central place where the crop community can gather to generate such standardized vocabu...

Enlace original: https://cgspace.cgiar.org/handle/10568/52052

Investigación en Agricultura
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Matteis L ,  Chibon P ,  Espinosa, H. ,  Skofic M ,  Finkers R ,  Bruskiewich, R. ,  Hyman, Glenn ,  Arnaud, Elizabeth ,  [Crop ontology: vocabulary for crop-related concepts] ,  Crop ontology: vocabulary for crop-related concepts
Journal Article 2017

Autor: Cooper, L. Meier, A. Laporte, M-A. Elser, J.L. Mungall, C. Sinn, B.T. Cavaliere, D. Carbon, S. Dunn, N.A. Smith, B. Qu, B. Preece, J. Zhang, E. Todorovic, S. Gkouto, G. Doonan, J.H. Stevenson, D.W. Arnaud, Elizabeth Jaiswal, P.

The Planteome project (http://www.planteome.org) provides a suite of reference and species-specific ontologies for plants and annotations to genes and phenotypes. Ontologies serve as common standards for semantic integration of a large and growing corpus of plant genomics, phenomics and genetics ...

Enlace original: https://cgspace.cgiar.org/handle/10568/89498

Investigación en Agricultura
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Cooper, L. ,  Meier, A. ,  Laporte, M-A. ,  Elser, J.L. ,  Mungall, C. ,  Sinn, B.T. ,  Cavaliere, D. ,  Carbon, S. ,  Dunn, N.A. ,  Smith, B. ,  Qu, B. ,  Preece, J. ,  Zhang, E. ,  Todorovic, S. ,  Gkouto, G. ,  Doonan, J.H. ,  Stevenson, D.W. ,  Arnaud, Elizabeth ,  Jaiswal, P. ,  [The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics] ,  The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics
Poster 2009

Autor: Shrestha, R. Mauleon, R. Simon, R. Jayashree, B. Channelière, S. Alercia, A. Senger, M. Manansala, K. Metz, T. Davenport, G. Bruskiewich, R. McLaren, G. Arnaud, Elizabeth
Enlace original: https://cgspace.cgiar.org/handle/10568/67553

Investigación en Agricultura
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Shrestha, R. ,  Mauleon, R. ,  Simon, R. ,  Jayashree, B. ,  Channelière, S. ,  Alercia, A. ,  Senger, M. ,  Manansala, K. ,  Metz, T. ,  Davenport, G. ,  Bruskiewich, R. ,  McLaren, G. ,  Arnaud, Elizabeth ,  [Development of GCP ontology for sharing crop information.] ,  Development of GCP ontology for sharing crop information.
Poster 2010

Autor: Shrestha, R. Senger, M. Ramil, M. Davenport, G. Arnaud, Elizabeth
Enlace original: https://cgspace.cgiar.org/handle/10568/67554

Investigación en Agricultura
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Shrestha, R. ,  Senger, M. ,  Ramil, M. ,  Davenport, G. ,  Arnaud, Elizabeth ,  [Development of GCP Ontology for sharing crop information] ,  Development of GCP Ontology for sharing crop information
Poster 2011

Autor: Kulakow, P.A. Bakare, M.A. Shrestha, R. Arnaud, Elizabeth
Enlace original: https://cgspace.cgiar.org/handle/10568/67513

Investigación en Agricultura
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Kulakow, P.A. ,  Bakare, M.A. ,  Shrestha, R. ,  Arnaud, Elizabeth ,  [Expansion of the crop ontology by adding cassava trait ontology] ,  Expansion of the crop ontology by adding cassava trait ontology
Poster 2016-01-18

Autor: Agbona, A. Kulakow, P.A. Rabbi, Ismail Y. Prasad, P. Arnaud, Elizabeth Valette, L. Angelique, M. Mueller, L. Menda, N.
Enlace original: https://cgspace.cgiar.org/handle/10568/72392

Investigación en Agricultura
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Agbona, A. ,  Kulakow, P.A. ,  Rabbi, Ismail Y. ,  Prasad, P. ,  Arnaud, Elizabeth ,  Valette, L. ,  Angelique, M. ,  Mueller, L. ,  Menda, N. ,  [Cassavabase (cassavabase.org): an integrated field breeding and genomics database enables accelerated genetic gain in cassava] ,  Cassavabase (cassavabase.org): an integrated field breeding and genomics database enables accelerated genetic gain in cassava
Conference Paper 2016

Autor: Valette, L. Pietragalla, J. Laporte, M-A. Afolabi, A. Boukar, O. Cannon, Steven B. Diers, D.W. Dreher, K.A. Gaur, Pooran M. Guerrero, A.F. Hash, C.T. Hualla, V. Inoussa, D. Kalberer, S.R. Kondombo-Barro, C.P. Kumar, S. López Montes, A. Menda, N. Nelson, R. Ofodile, S. Patil, S. Prasad, P. Rajendran, K. Rami, J.F. Rathore, A. Sackville Hamilton, N.R. Reinhard Simon, Guvener Selim Teme, N. Weltzien, Eva Arnaud, Elizabeth Shrestha, R.

The Crop Ontology (CO, http://www.cropontology.org/) is a resource of the Integrated Breeding Platform (IBP, http://integratedbreeding.net/) providing breeders with crop specific terms for fieldbook edition and data annotation. Until Mai 2015, a plant phenotype was annotated with 3 CO identifiers...

Enlace original: https://cgspace.cgiar.org/handle/10568/78758

Investigación en Agricultura
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Valette, L. ,  Pietragalla, J. ,  Laporte, M-A. ,  Afolabi, A. ,  Boukar, O. ,  Cannon, Steven B. ,  Diers, D.W. ,  Dreher, K.A. ,  Gaur, Pooran M. ,  Guerrero, A.F. ,  Hash, C.T. ,  Hualla, V. ,  Inoussa, D. ,  Kalberer, S.R. ,  Kondombo-Barro, C.P. ,  Kumar, S. ,  López Montes, A. ,  Menda, N. ,  Nelson, R. ,  Ofodile, S. ,  Patil, S. ,  Prasad, P. ,  Rajendran, K. ,  Rami, J.F. ,  Rathore, A. ,  Sackville Hamilton, N.R. ,  Reinhard Simon, Guvener Selim ,  Teme, N. ,  Weltzien, Eva ,  Arnaud, Elizabeth ,  Shrestha, R. ,  [Crop ontology: integration of standard variables] ,  Crop ontology: integration of standard variables
Conference Paper 2016

Autor: Jonquet, C. Dzale-Yeumo, E. Arnaud, Elizabeth Larmande, Pierre Toulet, A. Laporte, M-A.

Our project is to develop and support a reference ontology repository for the agronomic domain. By reusing the NCBO BioPortal technology, we have already designed and implemented a prototype ontology repository for plants and a few crops. We plan to turn that prototype into a real service to the ...

Enlace original: https://cgspace.cgiar.org/handle/10568/78753

Investigación en Agricultura
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Jonquet, C. ,  Dzale-Yeumo, E. ,  Arnaud, Elizabeth ,  Larmande, Pierre ,  Toulet, A. ,  Laporte, M-A. ,  [AgroPortal: a proposition for ontology-based services in the agronomic domain] ,  AgroPortal: a proposition for ontology-based services in the agronomic domain
Poster 2016

Autor: Valette, L. Pietragalla, J. Laporte, M-A. Afolabi, A. Boukar, O. Cannon, Steven B. Diers, D.W. Dreher, K.A. Gaur, Pooran M. Guerrero, A.F. Hash, C.T. Hualla, V. Inoussa, D. Kalberer, S.R. Kondombo-Barro, C.P. Kumar, S. López Montes, A. Menda, N. Nelson, R. Ofodile, S. Patil, S. Prasad, P. Rajendran, K. Rami, J.F. Rathore, A. Sackville Hamilton, N.R. Reinhard Simon, Guvener Selim Teme, N. Weltzien, Eva Arnaud, Elizabeth Shrestha, R.
Enlace original: https://cgspace.cgiar.org/handle/10568/78763

Investigación en Agricultura
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Valette, L. ,  Pietragalla, J. ,  Laporte, M-A. ,  Afolabi, A. ,  Boukar, O. ,  Cannon, Steven B. ,  Diers, D.W. ,  Dreher, K.A. ,  Gaur, Pooran M. ,  Guerrero, A.F. ,  Hash, C.T. ,  Hualla, V. ,  Inoussa, D. ,  Kalberer, S.R. ,  Kondombo-Barro, C.P. ,  Kumar, S. ,  López Montes, A. ,  Menda, N. ,  Nelson, R. ,  Ofodile, S. ,  Patil, S. ,  Prasad, P. ,  Rajendran, K. ,  Rami, J.F. ,  Rathore, A. ,  Sackville Hamilton, N.R. ,  Reinhard Simon, Guvener Selim ,  Teme, N. ,  Weltzien, Eva ,  Arnaud, Elizabeth ,  Shrestha, R. ,  [Crop ontology: integration of standard variables] ,  Crop ontology: integration of standard variables

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