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Conference Paper 2016

Abiotic stress research in crops using -omics approaches: drought stress and banana in the spotlight

Autor: Kissel, E. Vanhove, A.C. García, S. Panis, B. Rouard, M. Cenci, A. Roux, N. Zorrilla, J. Swennen, R.L. Carpentier, S.C.

Evaluating crop biodiversity is a challenging task and needs to integrate knowledge from different levels. This overview paper offers ways to tackle this challenge, illustrated by the case for drought tolerance in banana. KU Leuven hosts the International Musa Germplasm Collection managed by Biov...

Enlace original: https://cgspace.cgiar.org/handle/10568/73063

Investigación en Agricultura

BIODIVERSITY

DROUGHT TOLERANCE

GENOMICS

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Kissel, E. , Vanhove, A.C. , García, S. , Panis, B. , Rouard, M. , Cenci, A. , Roux, N. , Zorrilla, J. , Swennen, R.L. , Carpentier, S.C. , [Abiotic stress research in crops using -omics approaches: drought stress and banana in the spotlight] , Abiotic stress research in crops using -omics approaches: drought stress and banana in the spotlight

Journal Article 2017

Elucidation of the compatible interaction between banana and Meloidogyne incognita via high-throughput proteome profiling

Autor: Al-Idrus, A. Carpentier, S.C. Ahmad, M.T. Panis, B. Mohamed, Z.

With a diverse host range, Meloidogyne incognita (root-knot nematode) is listed as one of the most economically important obligate parasites of agriculture. This nematode species establishes permanent feeding sites in plant root systems soon after infestation. A compatible host-nematode interacti...

Enlace original: https://cgspace.cgiar.org/handle/10568/82710

Investigación en Agricultura

MUSA

MELOIDOGYNE INCOGNITO

NEMATODA

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Al-Idrus, A. , Carpentier, S.C. , Ahmad, M.T. , Panis, B. , Mohamed, Z. , [Elucidation of the compatible interaction between banana and Meloidogyne incognita via high-throughput proteome profiling] , Elucidation of the compatible interaction between banana and Meloidogyne incognita via high-throughput proteome profiling

Conference Paper 2016

The quest for tolerant varieties: integration of -omics techniques to understand stress in non-model crops

Autor: Carpentier, S.C. Kissel, E. Janial, M. Rouard, M. Zorrilla, J. Swennen, R.L.

Millions of people depend on rain fed crop systems that are very prone to fluctuating water availability. In-depth knowledge on the plant’s stress response is therefore of utmost importance. However, in many crops not much is known about the genes involved in early stress response and their link ...

Enlace original: https://cgspace.cgiar.org/handle/10568/78751

Investigación en Agricultura

ABIOTIC STRESS

TOLERANCE

PHENOTYPES

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Carpentier, S.C. , Kissel, E. , Janial, M. , Rouard, M. , Zorrilla, J. , Swennen, R.L. , [The quest for tolerant varieties: integration of -omics techniques to understand stress in non-model crops] , The quest for tolerant varieties: integration of -omics techniques to understand stress in non-model crops

Journal Article 2018-02-23

The plantain proteome, a focus on Allele specific proteins obtained from plantain fruits

Autor: Campos, N.A. Swennen, R.L. Carpentier, S.C.

Proteomics has been applied with great potential to elucidate molecular mechanisms in plants. This is especially valid in the case of non-model crops of which their genome has not been sequenced yet, or is not well annotated. Plantains are a kind of cooking bananas that are economically very impo...

Enlace original: https://cgspace.cgiar.org/handle/10568/92999

Investigación en Agricultura

PLANTAINS

ALLELE

PROTEINS

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Campos, N.A. , Swennen, R.L. , Carpentier, S.C. , [The plantain proteome, a focus on Allele specific proteins obtained from plantain fruits] , The plantain proteome, a focus on Allele specific proteins obtained from plantain fruits

Journal Article 2019-03-26

Using growth and transpiration phenotyping under controlled conditions to select water efficient banana genotypes

Autor: Wesemael, J. van Kissel, E. Eyland, D. Lawson, T. Swennen, R. Carpentier, S.C.

Water deficit is one of the world’s major constraints in agriculture and will aggravate in the future. Banana (Musa spp.) is an important crop that needs vast amounts of water for optimal production. The International Transit Center of Bioversity International holds the world’s biggest collection...

Enlace original: https://cgspace.cgiar.org/handle/10568/101242

Investigación en Agricultura

BIODIVERSITY

BANANAS

WATER USE EFFICIENCY

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Wesemael, J. van , Kissel, E. , Eyland, D. , Lawson, T. , Swennen, R. , Carpentier, S.C. , [Using growth and transpiration phenotyping under controlled conditions to select water efficient banana genotypes] , Using growth and transpiration phenotyping under controlled conditions to select water efficient banana genotypes

Journal Article 2019-03-27

Effect of paleopolyploidy and allopolyploidy on gene expression in banana

Autor: Cenci, A. Hueber, Y. Zorrilla-Fontanesi, Y. Wesemael, J. van Kissel, E. Gislard, M. Sardos, J. Swennen, R. Roux, N. Carpentier, S.C. Rouard, M.

Bananas (Musa spp.) are an important crop worldwide. Most modern cultivars resulted from a complex polyploidization history that comprised three whole genome duplications (WGDs) shaping the haploid Musa genome, followed by inter- and intra-specific crosses between Musa acuminata and M. balbisiana...

Enlace original: https://cgspace.cgiar.org/handle/10568/101238

Investigación en Agricultura

BANANAS

POLYPLOIDY

GENETIC STUCTURES

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Cenci, A. , Hueber, Y. , Zorrilla-Fontanesi, Y. , Wesemael, J. van , Kissel, E. , Gislard, M. , Sardos, J. , Swennen, R. , Roux, N. , Carpentier, S.C. , Rouard, M. , [Effect of paleopolyploidy and allopolyploidy on gene expression in banana] , Effect of paleopolyploidy and allopolyploidy on gene expression in banana

Journal Article 2012

Screening the banana biodiversity for drought tolerance: can an in vitro growth model and proteomics be used as a tool to discover tolerant varieties and understand homeostasis

Autor: Vanhove, A.C. Vermaelen, W. Panis, B. Swennen, R. Carpentier, S.C.

Enlace original: https://cgspace.cgiar.org/handle/10568/35810

Investigación en Agricultura

BIODIVERSITY

DROUGHT RESISTANCE

GROWTH

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Vanhove, A.C. , Vermaelen, W. , Panis, B. , Swennen, R. , Carpentier, S.C. , [Screening the banana biodiversity for drought tolerance: can an in vitro growth model and proteomics be used as a tool to discover tolerant varieties and understand homeostasis] , Screening the banana biodiversity for drought tolerance: can an in vitro growth model and proteomics be used as a tool to discover tolerant varieties and understand homeostasis

Journal Article 2016-03-03

Differential root transcriptomics in a polyploid non-model crop: the importance of respiration during osmotic stress

Autor: Zorrilla-Fontanesi, Y. Rouard, M. Cenci, A. Kissel, E. Do, H. Dubois, E. Nidelet, S. Roux, N. Swennen, R.L. Carpentier, S.C.

To explore the transcriptomic global response to osmotic stress in roots, 18 mRNA-seq libraries were generated from three triploid banana genotypes grown under mild osmotic stress (5% PEG) and control conditions. Illumina sequencing produced 568 million high quality reads, of which 70–84% were ma...

Enlace original: https://cgspace.cgiar.org/handle/10568/72891

Investigación en Agricultura

OSMOTIC STRESS

BANANAS

DROUGHT STRESS

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Zorrilla-Fontanesi, Y. , Rouard, M. , Cenci, A. , Kissel, E. , Do, H. , Dubois, E. , Nidelet, S. , Roux, N. , Swennen, R.L. , Carpentier, S.C. , [Differential root transcriptomics in a polyploid non-model crop: the importance of respiration during osmotic stress] , Differential root transcriptomics in a polyploid non-model crop: the importance of respiration during osmotic stress

Journal Article 2015

Data for the characterization of the HSP70 family during osmotic stress in banana, a non-model crop.

Autor: Vanhove, A.C. Vermaelen, W. Cenci, A. Swennen, R.L. Carpentier, S.C.

Data is presented from an in-depth analysis of the HSP70 family in the non-model banana during osmotic stress [1]. First, a manual curation of HSP70 sequences from the banana genome was performed and updated on the Musa hub http://banana-genome.cirad.fr/. These curated protein sequences were then...

Enlace original: https://cgspace.cgiar.org/handle/10568/67152

Investigación en Agricultura

DATA

DATA ANALYSIS

MUSA

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Vanhove, A.C. , Vermaelen, W. , Cenci, A. , Swennen, R.L. , Carpentier, S.C. , [Data for the characterization of the HSP70 family during osmotic stress in banana, a non-model crop.] , Data for the characterization of the HSP70 family during osmotic stress in banana, a non-model crop.

Poster 2016

How do roots respond to osmotic stress? A transcriptomic approach to address this question in a non-model crop

Autor: Zorrilla-Fontanesi, Y. Rouard, M. Cenci, A. Kissel, E. Roux, N. Swennen, R.L. Carpentier, S.C.

Drought is a complex phenomenon that is relevant for many crops. Performing high-throughput transcriptomics in non-model crops is challenging. The non-model crop where our workflow has been tested on is banana (Musa spp.), which ranks among the top ten staple foods (total production over 145 mill...

Enlace original: https://cgspace.cgiar.org/handle/10568/77311

Investigación en Agricultura

DROUGHT

CLIMATE CHANGE

ROOTS

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Zorrilla-Fontanesi, Y. , Rouard, M. , Cenci, A. , Kissel, E. , Roux, N. , Swennen, R.L. , Carpentier, S.C. , [How do roots respond to osmotic stress? A transcriptomic approach to address this question in a non-model crop] , How do roots respond to osmotic stress? A transcriptomic approach to address this question in a non-model crop

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Resultados de búsqueda

[1114.jpg]

[Aisyafaznim_2017.pdf]

[U19ArtVanwesemaelGrowthInthomNodev.pdf]

[U19ArtCenciEffectInthomNodev.pdf]

[Vanhove_screeninbananabiodiversity.pdf]

[U16ArtZorrillafontanesiDifferentialInthomNodev.pdf]

[Vanhove_dataCharacterization_HSP70.pdf]

[Poster_EPSOMeeting_JZ.PDF]