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Droc, GaëtanLariviere, D.Guignon, V.Yahiaoui, N.This, D.Garsmeur, O.Dereeper, A.Hamelin, C.Argout, X.Dufayard, Jean-FrançoisLengelle, J.Baurens, F.C.Cenci, A.Pitollat, B.D'Hont, A.Ruiz, M.Rouard, M.Bocs, S.[The Banana Genome Hub]The Banana Genome Hub

Polygalacturonase-inhibiting proteins (PGIPs) are leucine-rich repeat (LRR) plant cell wall glycoproteins involved in plant immunity. They are typically encoded by gene families with a small number of gene copies whose evolutionary origin has been poorly investigated. Here we report the complete ...


Kalunke, R.M.Cenci, A.Volpi, C.O'Sullivan, D.M.Sella, L.Favaron, F.Cervone, F.Lorenzo, G. deD'Ovidio, R.[The pgip family in soybean and three other legume species: evidence for a birth-and-death model of evolution]The pgip family in soybean and three other legume species: evidence for a birth-and-death model of evolution

Edible bananas result from interspecific hybridization between Musa acuminata and Musa balbisiana, as well as among subspecies in M. acuminata. Four particular M. acuminata subspecies have been proposed as the main contributors of edible bananas, all of which radiated in a short period of time in...


Rouard, M.Droc, GaëtanMartin, G.Hueber, Y.Sardos, J.Guignon, V.Cenci, A.Geigle, B.Hibbins, M.Yahiaoui, N.Baurens, F.C.Berry, V.Hahn, M.D’Hont, A.Roux, N.[Three new genome assemblies support a rapid radiation in Musa acuminata (wild banana)]Three new genome assemblies support a rapid radiation in Musa acuminata (wild banana)

GRAS transcription factors (TFs) play critical roles in plant growth and development such as gibberellin and mycorrhizal signaling. Proteins belonging to this gene family contain a typical GRAS domain in the C-terminal sequence, whereas the N-terminal region is highly variable. Although, GRAS gen...


Cenci, A.Rouard, M.[Evolutionary analyses of GRAS transcription factors in angiosperms]Evolutionary analyses of GRAS transcription factors in angiosperms

Fusarium wilt disease, caused by Fusarium oxysporum f. sp. cubense, especially by tropical race 4 (Foc TR4), is threatening the global banana industry. Musa acuminata Pahang, a wild diploid banana that displays strong resistance to Foc TR4, holds great potential to understand the underlying resis...


Zhang, L.Cenci, A.Rouard, M.Zhang, D.Wang, Y.Tang, W.Zheng, S.J.[Transcriptomic analysis of resistant and susceptible banana corms in response to infection by Fusarium oxysporum f. sp. cubense tropical race 4]Transcriptomic analysis of resistant and susceptible banana corms in response to infection by Fusarium oxysporum f. sp. cubense tropical race 4

Long-term cell cultures were used in coffee to study the cytological, genetic and epigenetic changes occurring during cell culture ageing. The objective was to identify the mechanisms associated with somaclonal variation (SV). Three embryogenic cell lines were established in Coffea arabica (2n = ...


Bobadilla Landey, R.Cenci, A.Guyot, R.Bertrand, B.Georget, F.Dechamp, E.Herrera, J.C.Aribi, J.Lashermes, P.Etienne, H.[Assessment of genetic and epigenetic changes during cell culture ageing and relations with somaclonal variation in Coffea arabica]Assessment of genetic and epigenetic changes during cell culture ageing and relations with somaclonal variation in Coffea arabica

Bananas (Musa spp.) are an important crop worldwide. Most modern cultivars resulted from a complex polyploidization history that comprised three whole genome duplications (WGDs) shaping the haploid Musa genome, followed by inter- and intra-specific crosses between Musa acuminata and M. balbisiana...


Cenci, A.Hueber, Y.Zorrilla-Fontanesi, Y.Wesemael, J. vanKissel, E.Gislard, M.Sardos, J.Swennen, R.Roux, N.Carpentier, S.C.Rouard, M.[Effect of paleopolyploidy and allopolyploidy on gene expression in banana]Effect of paleopolyploidy and allopolyploidy on gene expression in banana

To explore the transcriptomic global response to osmotic stress in roots, 18 mRNA-seq libraries were generated from three triploid banana genotypes grown under mild osmotic stress (5% PEG) and control conditions. Illumina sequencing produced 568 million high quality reads, of which 70–84% were ma...


Zorrilla-Fontanesi, Y.Rouard, M.Cenci, A.Kissel, E.Do, H.Dubois, E.Nidelet, S.Roux, N.Swennen, R.L.Carpentier, S.C.[Differential root transcriptomics in a polyploid non-model crop: the importance of respiration during osmotic stress]Differential root transcriptomics in a polyploid non-model crop: the importance of respiration during osmotic stress

Identifying the molecular mechanisms underlying tolerance to abiotic stresses is important in crop breeding. A comprehensive understanding of the gene families associated with drought tolerance is therefore highly relevant. NAC transcription factors form a large plant-specific gene family involve...


Cenci, A.Guignon, V.Roux, N.Rouard, M.[Genomic analysis of NAC transcription factors in banana (Musa acuminata) and definition of NAC orthologous groups for monocots and dicots]Genomic analysis of NAC transcription factors in banana (Musa acuminata) and definition of NAC orthologous groups for monocots and dicots

Data is presented from an in-depth analysis of the HSP70 family in the non-model banana during osmotic stress [1]. First, a manual curation of HSP70 sequences from the banana genome was performed and updated on the Musa hub http://banana-genome.cirad.fr/. These curated protein sequences were then...


Vanhove, A.C.Vermaelen, W.Cenci, A.Swennen, R.L.Carpentier, S.C.[Data for the characterization of the HSP70 family during osmotic stress in banana, a non-model crop.]Data for the characterization of the HSP70 family during osmotic stress in banana, a non-model crop.

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