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Banana cultivars (Musa ssp.) are diploid, triploid and tetraploid hybrids derived from Musa acuminata and Musa balbisiana. We presented a high-quality draft genome assembly of M. balbisiana with 430 Mb (87%) assembled into 11 chromosomes. We identified that the recent divergence of M. acuminata (...


Zhang, J.Li, J.Xu, Y.Wang, J.Ma, W.Wu, Z.Yu, L.Yang, Y.Liu, C.Guo, Y.Sun, S.Baurens, F.C.Martin, G.Salmon, F.Garsmeur, O.Yahiaoui, N.Hervouet, C.Rouard, M.Laboureau, N.Habas, R.Ricci, S.Peng, M.Guo, A.Xie, J.Li, Y.Ding, Z.Yan, Y.Tie, W.D’Hont, A.Hu, W.Jin, Z.[Musa balbisiana genome reveals subgenome evolution and functional divergence]Musa balbisiana genome reveals subgenome evolution and functional divergence

Droc, GaëtanLariviere, D.Guignon, V.Yahiaoui, N.This, D.Garsmeur, O.Dereeper, A.Hamelin, C.Argout, X.Dufayard, Jean-FrançoisLengelle, J.Baurens, F.C.Cenci, A.Pitollat, B.D'Hont, A.Ruiz, M.Rouard, M.Bocs, S.[The Banana Genome Hub]The Banana Genome Hub

The whole genome sequence of Coffea canephora, the perennial diploid species known as Robusta, has been recently released. In the context of the C. canephora genome sequencing project and to support post-genomics efforts, we developed the Coffee Genome Hub (http://coffee-genome.org/), an integrat...


Dereeper, A.Bocs, S.Rouard, M.Guignon, V.Ravel, S.Tranchant-Dubreuil, C.Poncet, V.Garsmeur, O.Lashermes, P.Droc, Gaëtan[The coffee genome hub: a resource for coffee genomes]The coffee genome hub: a resource for coffee genomes

Summary: We developed a controller that is compliant with the Chado database schema, GBrowse and genome annotation-editing tools such as Artemis and Apollo. It enables the management of public and private data, monitors manual annotation (with controlled vocabularies, structural and functional an...


Guignon, V.Droc, GaëtanAlaux, M.Baurens, F.C.Garsmeur, O.Poiron, C.Carver, T.Rouard, M.Bocs, S.[Chado Controller: advanced annotation management with a community annotation system]Chado Controller: advanced annotation management with a community annotation system

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