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Melville, J.S.Jiang, Z.Gibbins, A.M.V.Robinson, J.A.B.Gibson, John P.[Chromosome-wide scanning of SSC3 for QTL associated with prolificacy in a Meishan x Large White population using a comparative mapping approach. Abstract]Chromosome-wide scanning of SSC3 for QTL associated with prolificacy in a Meishan x Large White population using a comparative mapping approach. Abstract
Ng'ang'a, J.K.Gibson, John P.Kemp, Stephen J.Iraqi, F.A.[High resolution mapping of trypanotolerance QTL Tir2 and 3 using F12 advanced intercross lines. Abstract]High resolution mapping of trypanotolerance QTL Tir2 and 3 using F12 advanced intercross lines. Abstract

Genetic diversity of the indigenous cattle of Kenya, Uganda, Ethiopia and Tanzania using high-density SNP data. The indigenous cattle make a significant contribution to the livelihood of many communities in Ethiopia, Tanzania and other countries in eastern Africa. Here, we identify the genetic st...


Weerasinghe, ShalaneeGibson, John P.Gondro, CedricOkeyo Mwai, AllyOjango, Julie M.K.Rao, E.J.O.Dessie, TadelleMujibi, DenisRege, J.E.O.[Genetic diversity of the indigenous cattle of Kenya, Uganda, Ethiopia and Tanzania using high-density SNP data]Genetic diversity of the indigenous cattle of Kenya, Uganda, Ethiopia and Tanzania using high-density SNP data

Cost-effective genotyping of livestock species can be done through a process which involves genotyping part of the population using a high density (HD) panel and the remainder with a lower density panel and then use imputation to infer the missing genotypes that are not included on the low densit...


Aliloo, HassanMrode, Raphael A.Okeyo Mwai, AllyOjango, Julie M.K.Dessie, TadelleRege, J.E.O.Goddard, M.Gibson, John P.[Optimal design of low density marker panels for genotype imputation]Optimal design of low density marker panels for genotype imputation

Reproductive performance and disease data were recorded for 2 years on 1,824 dairy cows in smallholder farms using participatory approaches and onfarm recording. Most animals experienced one service to conception. Calving intervals were long, ranging between 261 and 761 days, with an average of 4...


Mujibi, F.D.N.Ojango, Julie M.K.Rao, E.J.O.Karanja, T.Kihara, AbsolomonMarete, A.Baltenweck, IsabellePoole, Elizabeth J.Rege, J.E.O.Gondro, C.Weerasinghe, W.M.S.P.Gibson, John P.Okeyo Mwai, Ally[Use of high density SNP genotypes to determine the breed composition of cross bred dairy cattle in smallholder farms: Assessment of reproductive and health performance]Use of high density SNP genotypes to determine the breed composition of cross bred dairy cattle in smallholder farms: Assessment of reproductive and health performance

A genome-wide scan was performed to detect quantitative trait loci (QTL) for resistance to the gastrointestinal nematode Haemonchus contortus in a double backcross population of Red Maasai and Dorper sheep. The mapping population comprised six sire families, with 1026 lambs in total. The lambs we...


Marshall, KarenMugambi, J.M.M.Nagda, S.M.Sonstegard, T.S.Tassell, C.P. vanBaker, R.L.Gibson, John P.[Quantitative trait loci for resistance to Haemonchus contortus artificial challenge in Red Maasai and Dorper sheep of East Africa]Quantitative trait loci for resistance to Haemonchus contortus artificial challenge in Red Maasai and Dorper sheep of East Africa
Weerasinghe, W.M.S.P.Gondro, C.Jeyaruban, M.G.Okeyo Mwai, AllyMujibi, DenisGibson, John P.[The prediction of genetic structure of East African smallholder dairy cattle]The prediction of genetic structure of East African smallholder dairy cattle
Strucken, E.M.Esquivelzeta-Rabell, C.Al-Mamun, H.A.Gondro, C.Okeyo Mwai, AllyGibson, John P.[SNP-panel design for dairy proportion estimation and parentage testing]SNP-panel design for dairy proportion estimation and parentage testing

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