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Droc, GaëtanLariviere, D.Guignon, V.Yahiaoui, N.This, D.Garsmeur, O.Dereeper, A.Hamelin, C.Argout, X.Dufayard, Jean-FrançoisLengelle, J.Baurens, F.C.Cenci, A.Pitollat, B.D'Hont, A.Ruiz, M.Rouard, M.Bocs, S.[The Banana Genome Hub]The Banana Genome Hub

The whole genome sequence of Coffea canephora, the perennial diploid species known as Robusta, has been recently released. In the context of the C. canephora genome sequencing project and to support post-genomics efforts, we developed the Coffee Genome Hub (http://coffee-genome.org/), an integrat...


Dereeper, A.Bocs, S.Rouard, M.Guignon, V.Ravel, S.Tranchant-Dubreuil, C.Poncet, V.Garsmeur, O.Lashermes, P.Droc, Gaëtan[The coffee genome hub: a resource for coffee genomes]The coffee genome hub: a resource for coffee genomes

Edible bananas result from interspecific hybridization between Musa acuminata and Musa balbisiana, as well as among subspecies in M. acuminata. Four particular M. acuminata subspecies have been proposed as the main contributors of edible bananas, all of which radiated in a short period of time in...


Rouard, M.Droc, GaëtanMartin, G.Hueber, Y.Sardos, J.Guignon, V.Cenci, A.Geigle, B.Hibbins, M.Yahiaoui, N.Baurens, F.C.Berry, V.Hahn, M.D’Hont, A.Roux, N.[Three new genome assemblies support a rapid radiation in Musa acuminata (wild banana)]Three new genome assemblies support a rapid radiation in Musa acuminata (wild banana)

Rouard, M.Dereeper, A.Droc, GaëtanSarah, G.Dufayard, Jean-FrançoisGuignon, V.Hamelin, C.Homa, F.Lamotte, F. deLarmande, PierreLariviere, D.Sabot, F.Sempere, G.Summo, M.Pitollat, B.This, D.Bocs, S.Ruiz, M.[The South Green Bioinformatics platform]The South Green Bioinformatics platform
Denoeud, F.Carretero-Paulet, L.Dereeper, A.Guignon, V.Rouard, M.[The coffee genome provides insight into the convergent evolution of caffeine biosynthesis]The coffee genome provides insight into the convergent evolution of caffeine biosynthesis

The study of gene families is an important field of comparative genomics, allowing, by the analysis of evolutionary history, to identify homology relationships, gene losses and to help in annotation transfers. The addition of metabolic information improves the identification of candidate genes by...


Larivière, D.Couvin, D.Droc, GaëtanLorenzo, G.Guignon, V.Rouard, M.Lyons, E.This, D.Bocs, S.Dufayard, Jean-François[Comparative genomics of gene families in relation with metabolic pathways for gene candidates highlighting]Comparative genomics of gene families in relation with metabolic pathways for gene candidates highlighting

Guignon, V.Droc, GaëtanRouard, M.Baurens, F.C.Ruiz, M.Roux, N.Sidibe-Bocs, S.[A community annotation system for Musa genomes]A community annotation system for Musa genomes

Rouard, M.Guignon, V.Walde, C.Droc, GaëtanZmasek, C.Dufayard, Jean-FrançoisConte, M.G.[GreenPhylDB: phylogenomic resources for comparative and functional genomics in plants]GreenPhylDB: phylogenomic resources for comparative and functional genomics in plants

Guignon, V.Ruas, M.Droc, GaëtanDereeper, A.Sardos, J.Hueber, Y.Roux, N.Rouard, M.[Managing banana genetic resources and genomic information with the triplet Drupal/Tripal/Chado]Managing banana genetic resources and genomic information with the triplet Drupal/Tripal/Chado

Bananas (Musa spp.), including dessert and cooking types, are giant perennial monocotyledonous herbs of the order Zingiberales, a sister group to the well-studied Poales, which include cereals. Bananas are vital for food security in many tropical and subtropical countries and the most popular fru...


D'Hont, A.Denoeud, F.Aury, J.M.Baurens, F.C.Guignon, V.Dita, M.Roux, N.[The banana (Musa acuminata) genome and the evolution of monocotyledonous plants]The banana (Musa acuminata) genome and the evolution of monocotyledonous plants

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