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Ethiopia is endowed with huge traditional sheep populations spread across diverse ecology and production systems. We investigate genome-wide genetic diversity and population structure of eight Ethiopian Sheep populations genotyped with Illumina Ovine 50K SNP BeadChip assay. Mean genetic diversity...


Agraw, A.A.Gurja, B.Yao, Kouadio N.Kyalo, M.Dessie, TadelleKebede, A.Tesfaye, G.Domelevo Entfellner, Jean-BakaZewdu, E.Hanotte, Olivier H.Getinet, M.T.[Genome-wide Insights of Ethiopian indigenous sheep populations reveal the population structure adheres to tail morphology than phylogeography]Genome-wide Insights of Ethiopian indigenous sheep populations reveal the population structure adheres to tail morphology than phylogeography

Muturu cattle, mostly found nowadays in Nigeria, have been classified as an endangered cattle population due to the rapid decline in their population size. They are among the shorthorn West African B. taurus trypanotolerance cattle. Here, we report candidate signature of positive selection obtain...


Tijjani, A.Utsunomiya, Yuri TaniOyekanmi Nash, O.Hanotte, Olivier H.[Whole genome sequence-based genetic characterization of Muturu, an endangered trypanotolerant population of West African Bos Taurus]Whole genome sequence-based genetic characterization of Muturu, an endangered trypanotolerant population of West African Bos Taurus

Domesticated in the tropical humid and sub-humid areas of Asia, the indigenous domestic chickens are now found in all agro-ecologies across the world - including temperate, cold, hot and dry environments - where they sustain the livelihood of millions of small-holder farmers. Despite this, the un...


Hanotte, Olivier H.Trujillo, A.V.Kebede, A.Gheyas, A.[The importance of local adaptation for sustainable chicken production: the example of Ethiopia]The importance of local adaptation for sustainable chicken production: the example of Ethiopia

Kebede, A.Hanotte, Olivier H.Dessie, TadelleSpark, N.Belay, G.Tesfaye, K.Jung'a, J.O.Kyalo, MartinaGithae, D.Ekaya, Wellington N.Pelle, Roger[Diversity of LEI0258 microsatellite locus in indigenous Ethiopian chickens]Diversity of LEI0258 microsatellite locus in indigenous Ethiopian chickens
Lawal, R.A.Al-Atiyat, R.M.Aljumaah, R.S.Silva, P.Mwacharo, Joram M.Hanotte, Olivier H.[Whole-genome resequencing of red junglefowl and indigenous village chicken reveal new insights on the genome dynamics of the species]Whole-genome resequencing of red junglefowl and indigenous village chicken reveal new insights on the genome dynamics of the species

Background: The history of African indigenous cattle and their adaptation to environmental and human selection pressure is at the root of their remarkable diversity. Characterization of this diversity is an essential step towards understanding the genomic basis of productivity and adaptation to s...


Kim, JaeminHanotte, Olivier H.Okeyo Mwai, AllyDessie, TadelleSalim, BashirDiallo, BoubacarAgaba, MorrisKwondo KimWoori KwakSamsun SungSeo, MinseokJeong, HyeonsooKwon, TaehyungTaye, MengistieSong, Ki-DukLim, DajeongSeoae ChoLee, Hyun-JeongDuhak YoonSung Jong OhKemp, Stephen J.Hak-Kyo LeeHeebal Kim[The genome landscape of indigenous African cattle]The genome landscape of indigenous African cattle

At least 150 indigenous African cattle breeds have been named, but the majority of African cattle populations remain largely uncharacterized. As cattle breeds and populations in Africa adapted to various local environmental conditions, they acquired unique features. We know now that the history o...


Okeyo Mwai, AllyHanotte, Olivier H.Young-Jun KwonSeoae Cho[African indigenous cattle: Unique genetic resources in a rapidly changing world]African indigenous cattle: Unique genetic resources in a rapidly changing world
Ayalew, Y.Gültas, M.Effa, K.Hanotte, Olivier H.Schmitt, A.O.[Identification of candidate signature genes and key regulators associated with Trypanotolerance in the Sheko Breed]Identification of candidate signature genes and key regulators associated with Trypanotolerance in the Sheko Breed
Tijjani, AbdulfataiUtsunomiya, Yuri TaniEzekwe, Arinze G.Nashiru, OyekanmiHanotte, Olivier H.[Genome sequence analysis reveals selection signatures in endangered trypanotolerant West African Muturu cattle]Genome sequence analysis reveals selection signatures in endangered trypanotolerant West African Muturu cattle

We analyzed the whole genomes of cecum microbiomes of Ethiopian indigenous chickens from two distinct geographical zones: Afar (AF) district (Dulecha, 730 m above sea level) and Amhara (AM) district (Menz Gera Midir, 3300 m). Through metagenomic analysis we found that microbial populations were m...


Kumar, H.Park, W.Dajeong LimSrikanth, K.Jun-Mo KimXin-Zheng JiaHan JianlinHanotte, Olivier H.Park, J.-E.Oyola, Samuel O.[Whole metagenome sequencing of cecum microbiomes in Ethiopian indigenous chickens from two different altitudes reveals antibiotic resistance genes]Whole metagenome sequencing of cecum microbiomes in Ethiopian indigenous chickens from two different altitudes reveals antibiotic resistance genes

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