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The rearing of indigenous chickens is an integral part of the smallholder farming system in the tropics, where they are kept by the rural poor to fulfil multiple functions. Their special adaptation to environmental stresses and poor husbandry practices has made them the choice of breed for smallh...


Dessie, TadelleTaye, T.Dana, N.Ayalew, W.Hanotte, Olivier H.[Current state of knowledge on phenotypic characteristics of indigenous chickens in the tropics]Current state of knowledge on phenotypic characteristics of indigenous chickens in the tropics
Alshawi, A.Essa, A.Al-Bayatti, S.Hanotte, Olivier H.[Genome analysis reveals genetic admixture and signature of selection for productivity and environmental traits in Iraqi cattle]Genome analysis reveals genetic admixture and signature of selection for productivity and environmental traits in Iraqi cattle

Most studies of infectious diseases in East African cattle have concentrated on gastro-intestinal parasites and vector-borne diseases. As a result, relatively little is known about viral diseases, except for those that are clinically symptomatic or which affect international trade such as foot an...


Callaby, R.Toye, Philip G.Jennings, A.Thumbi, S.M.Wyk, I.C. vanHanotte, Olivier H.Mbole-Kariuki, Mary N.Bronsvoort, B.M. de C.Kruuk, L.E.B.Woolhouse, Mark E.J.Kiara, Henry K.[Seroprevalence of respiratory viral pathogens of indigenous calves in western Kenya]Seroprevalence of respiratory viral pathogens of indigenous calves in western Kenya

Variation in mitochondrial and microsatellite DNA was used to define the genetic structure of hartebeest populations straddling a transition zone between two morphotypes (Alcelaphus buselaphus cokei and A. b. lelwel) in Kenya. Previous analyses of mtDNA from hartebeest populations across Africa s...


Ouma, CRoca, A.L.Were, TRaballah, E.OOguge, N.OJura, W.G.Z.OOchieng, J.W.Hanotte, Olivier H.Georgiadis, N[Genetic Structure of Hartebeest Populations Straddling a Transition Zone between Morphotypes]Genetic Structure of Hartebeest Populations Straddling a Transition Zone between Morphotypes

In this study, we assessed the maternal origin of six Hungarian indigenous chicken breeds using mitochondrial DNA information. Sequences of Hungarian chickens were compared with the D-loop chicken sequences annotated in the GenBank and to nine previously described reference haplotypes representin...


Revay, T.Bodzsar, N.Mobegi, V.E.Hanotte, Olivier H.Hidas, A.[Origin of Hungarian indigenous chicken breeds inferred from mitochondrial DNA D-loop sequences]Origin of Hungarian indigenous chicken breeds inferred from mitochondrial DNA D-loop sequences

In this study, 30 microsatellite markers recommended by the International Society for Animal Genetics and the Food and Agriculture Organization were used to determine the extent of genetic differentiation and phylogenetic relationships among indigenous chicken populations sampled in Kenya, Uganda...


Hanotte, Olivier H.Nomura, K.Hanada, H.Hanotte, Olivier H.Amano, T.Han Jianlin[Genetic relationships among Kenyan and other East African indigenous chickens]Genetic relationships among Kenyan and other East African indigenous chickens

The publication of the first draft chicken sequence assembly became available in 2004 and was updated in 2006. However, this does not constitute a definitive and complete sequence of the chicken genome, since the microchromosomes are notably under-represented. In an effort to develop maps for the...


Douaud, M.Feve, K.Gerus, M.Fillon, V.Bardes, S.Gourichon, D.Dawson, D.A.Hanotte, Olivier H.Burke, T.Vignoles, F.Morrison, M.Tixier-Boichard, M.Vignal, A.Pitel, F.[Addition of the microchromosome GGA25 to the chicken genome sequence assembly through radiation hybrid and genetic mapping]Addition of the microchromosome GGA25 to the chicken genome sequence assembly through radiation hybrid and genetic mapping

Initially, domesticated African cattle were of taurine type. Today, we find both African Bos taurus and Bos indicus cattle, as well as their crossbreeds, on the continent of Africa and they all share the same set of African taurine mitochondrial DNA haplogroups. In this study, we report genetic v...


Anderung, C.Hellborg, L.Seddon, J.Hanotte, Olivier H.Gotherstrom, A.[Investigation of X- and Y-specific single nucleotide polymorphisms in taurine (Bos taurus) and indicine (Bos indicus) cattle]Investigation of X- and Y-specific single nucleotide polymorphisms in taurine (Bos taurus) and indicine (Bos indicus) cattle
Shu-ru ChengYu-Zhu LuoHanotte, Olivier H.Han Jianlin[Genetic Diversity and Origin of Gansu Indigenous Sheep Breeds Determined by Mitochondrial DNA D-loop Sequence]Genetic Diversity and Origin of Gansu Indigenous Sheep Breeds Determined by Mitochondrial DNA D-loop Sequence

The chicken (Gallus gallus), like most avian species, has a very distinct karyotype consisting of many micro- and a few macrochromosomes. While it is known that recombination frequencies are much higher for micro- as compared to macrochromosomes, there is limited information on differences in lin...


Megens, H-KCrooijmans, R.P.M.A.Bastiaansen, J.Kerstens, H.Coster, A.Jalving, R.Verejiken, A.Silva, P.Muir, W.Cheng, H.Hanotte, Olivier H.Groenen, M.[Comparison of linkage disequilibrium and haplotype diversity on macro- and microchromosomes in chicken]Comparison of linkage disequilibrium and haplotype diversity on macro- and microchromosomes in chicken

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