The apomictic reproductive mode of Brachiaria (syn. Urochloa) forage species allows breeders to faithfully propagate heterozygous genotypes through seed over multiple generations. In Brachiaria, reproductive mode segregates as single dominant locus, the apospory-specific genomic region (ASGR). Th...
Worthington, Margaret
,
Ebina, Masumi
,
Yamanaka, Naoki
,
Heffelfinger, Christopher
,
Quintero, Constanza
,
Zapata, Yeny Patricia
,
Pérez, Juan Guillermo
,
Selvaraj, Michael
,
Ishitani, Manabu
,
Duitama, Jorge
,
Hoz, Juan Fernando de la
,
Rao, Idupulapati M.
,
Dellaporta, Stephen L.
,
Tohme, Joseph M.
,
Arango, Jacobo
,
[Translocation of a parthenogenesis gene candidate to an alternate carrier chromosome in apomictic Brachiaria humidicola]
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Translocation of a parthenogenesis gene candidate to an alternate carrier chromosome in apomictic Brachiaria humidicola
Common bean (Phaseolus vulgaris L.) is the most important grain legume for human consumption and is a major nutrition source in the tropics. Because bean production is reduced by both abiotic and biotic constraints, current breeding efforts are focused on the development of improved varieties wit...
Lobaton, Juan David
,
Miller, Tamara
,
Gil, Juanita
,
Ariza, Daniel
,
Hoz, Juan Fernando de la
,
Soler Garzón, Alvaro
,
Beebe, Stephen E.
,
Duitama, Jorge
,
Gepts, Paul
,
Raatz, Bodo
,
[Resequencing of common bean identifies regions of inter- gene pool introgression and provides comprehensive resources for molecular breeding]
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Resequencing of common bean identifies regions of inter- gene pool introgression and provides comprehensive resources for molecular breeding
Investigation of large structural variants (SVs) is a challenging yet important task in understanding trait differences in highly repetitive genomes. Combining different bioinformatic approaches for SV detection, we analyzed whole-genome sequencing data from 3000 rice genomes and identified 63 mi...
Background
Therecent development and availability of different genotype by sequencing (GBS) protocols provided a cost-effective approach to perform high-resolution genomic analysis of entire populations in different species. The central component of all these protocols is the digestion of the ini...
Perea, Claudia
,
Hoz, Juan Fernando de la
,
Cruz, Daniel Felipe
,
Lobaton, Juan David
,
Izquierdo, Paulo
,
Quintero, Juan Camilo
,
Raatz, Bodo
,
Duitama, Jorge
,
[Bioinformatic analysis of genotype by sequencing (GBS) data with NGSEP]
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Bioinformatic analysis of genotype by sequencing (GBS) data with NGSEP