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Cassava (Manihot esculenta Crantz) is an important staple food in sub-Saharan Africa. Breeding experiments were conducted at the International Institute of Tropical Agriculture in cassava to select elite parents. Taking into account the heterogeneity in the field while evaluating these trials can...


Elias, A.A.Rabbi, Ismail Y.Kulakow, P.A.Jannink, Jean-Luc[Improving genomic prediction in cassava field experiments using spatial analysis]Improving genomic prediction in cassava field experiments using spatial analysis

Plants' competing for available resources is an unavoidable phenomenon in a field. We conducted studies in cassava (Manihot esculenta Crantz) in order to understand the pattern of this competition. Taking into account the competitive ability of genotypes while selecting parents for breeding advan...


Elias, A.A.Rabbi, Ismail Y.Kulakow, P.Jannink, Jean-Luc[Improving genomic prediction in cassava field experiments by accounting for interplot competition]Improving genomic prediction in cassava field experiments by accounting for interplot competition

Background: Genomic selection (GS) promises to accelerate genetic gain in plant breeding programs especially for crop species such as cassava that have long breeding cycles. Practically, to implement GS in cassava breeding, it is necessary to evaluate different GS models and to develop suitable m...


Okeke, U.G.Akdemir, D.Rabbi, Ismail Y.Kulakow, P.A.Jannink, Jean-Luc[Accuracies of univariate and multivariate genomic prediction models in African cassava]Accuracies of univariate and multivariate genomic prediction models in African cassava

Before implementation of genomic selection, evaluation of the potential accuracy of prediction can be obtained by cross-validation. In this procedure, a population with both phenotypes and genotypes is split into training and validation sets. The prediction model is fitted using the training set,...


Ly, D.Hamblin, M.Rabbi, Ismail Y.Gedil, M.Bakare, M.A.Gauch Jr. H.Okechukwu, R.U.Dixon, A.Kulakow, P.A.Jannink, Jean-Luc[Relatedness and genotype x environment interaction affect prediction accuracies in genomic selection: a study in cassava]Relatedness and genotype x environment interaction affect prediction accuracies in genomic selection: a study in cassava

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