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Journal Article 2017

Autor: Jonquet, C. Toulet, A. Arnaud, Elizabeth Aubin, S. Dzale-Yeumo, E. Emonet, V. Graybeal, J. Laporte, M-A. Musen, M.A. Pesce, V. Larmande, Pierre

Many vocabularies and ontologies are produced to represent and annotate agronomic data. However, those ontologies are spread out, in different formats, of different size, with different structures and from overlapping domains. Therefore, there is need for a common platform to receive and host the...

Enlace original: https://cgspace.cgiar.org/handle/10568/89904

Investigación en Agricultura
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Jonquet, C. ,  Toulet, A. ,  Arnaud, Elizabeth ,  Aubin, S. ,  Dzale-Yeumo, E. ,  Emonet, V. ,  Graybeal, J. ,  Laporte, M-A. ,  Musen, M.A. ,  Pesce, V. ,  Larmande, Pierre ,  [AgroPortal: a vocabulary and ontology repository for agronomy] ,  AgroPortal: a vocabulary and ontology repository for agronomy
Journal Article 2018

Autor: Venkatesan, A. Tagny Ngompe, G. El Hassouni, N. Chentli, I. Guignon, V. Jonquet, C. Ruiz, M. Larmande, P.

Recent advances in high-throughput technologies have resulted in a tremendous increase in the amount of omics data produced in plant science. This increase, in conjunction with the heterogeneity and variability of the data, presents a major challenge to adopt an integrative research approach. We ...

Enlace original: https://cgspace.cgiar.org/handle/10568/99412

Investigación en Agricultura
Enlace permanente

Venkatesan, A. ,  Tagny Ngompe, G. ,  El Hassouni, N. ,  Chentli, I. ,  Guignon, V. ,  Jonquet, C. ,  Ruiz, M. ,  Larmande, P. ,  [Agronomic Linked Data (AgroLD): A knowledge-based system to enable integrative biology in agronomy] ,  Agronomic Linked Data (AgroLD): A knowledge-based system to enable integrative biology in agronomy
Conference Paper 2016

Autor: Jonquet, C. Dzale-Yeumo, E. Arnaud, Elizabeth Larmande, Pierre Toulet, A. Laporte, M-A.

Our project is to develop and support a reference ontology repository for the agronomic domain. By reusing the NCBO BioPortal technology, we have already designed and implemented a prototype ontology repository for plants and a few crops. We plan to turn that prototype into a real service to the ...

Enlace original: https://cgspace.cgiar.org/handle/10568/78753

Investigación en Agricultura
Enlace permanente
Jonquet, C. ,  Dzale-Yeumo, E. ,  Arnaud, Elizabeth ,  Larmande, Pierre ,  Toulet, A. ,  Laporte, M-A. ,  [AgroPortal: a proposition for ontology-based services in the agronomic domain] ,  AgroPortal: a proposition for ontology-based services in the agronomic domain
Poster 2016

Autor: Jonquet, C. Dzale-Yeumo, E. Arnaud, Elizabeth Larmande, Pierre Toulet, A. Laporte, M-A.
Enlace original: https://cgspace.cgiar.org/handle/10568/78752

Investigación en Agricultura
Enlace permanente

Jonquet, C. ,  Dzale-Yeumo, E. ,  Arnaud, Elizabeth ,  Larmande, Pierre ,  Toulet, A. ,  Laporte, M-A. ,  [AgroPortal: a proposition for ontology-based services in the agronomic domain] ,  AgroPortal: a proposition for ontology-based services in the agronomic domain
Conference Paper 2016

Autor: Jonquet, C. Toulet, A. Arnaud, Elizabeth Aubin, S. Dzale-Yeumo, E. Emonet, V. Graybeal, J. Musen, M.A. Pommier, C. Larmande, Pierre

Many vocabularies and ontologies are produced to represent and annotate agronomic data. By reusing the NCBO BioPortal technology, we have already designed and implemented an advanced prototype ontology repository for the agronomy domain. We plan to turn that prototype into a real service to the c...

Enlace original: https://cgspace.cgiar.org/handle/10568/78778

Investigación en Agricultura
Enlace permanente

Jonquet, C. ,  Toulet, A. ,  Arnaud, Elizabeth ,  Aubin, S. ,  Dzale-Yeumo, E. ,  Emonet, V. ,  Graybeal, J. ,  Musen, M.A. ,  Pommier, C. ,  Larmande, Pierre ,  [Reusing the NCBO BioPortal technology for agronomy to build AgroPortal] ,  Reusing the NCBO BioPortal technology for agronomy to build AgroPortal
Journal Article 2017

Autor: Dzale-Yeumo, E. Alaux, M. Arnaud, Elizabeth Aubin, S. Baumann, U. Buche, P. Cooper, L. Cwiek-Kupczynska, H. Davey, R.P. Fulss, R.A. Jonquet, C. Laporte, M-A. Larmande, Pierre Pommier, C. Protonotarios, V. Reverte, C. Shrestha, R. Subirats, I. Venkatesan, A. Whan, A. Quesneville, H.

In this article, we present a joint effort of the wheat research community, along with data and ontology experts, to develop wheat data interoperability guidelines. Interoperability is the ability of two or more systems and devices to cooperate and exchange data, and interpret that shared informa...

Enlace original: https://cgspace.cgiar.org/handle/10568/89854

Investigación en Agricultura
Enlace permanente

Dzale-Yeumo, E. ,  Alaux, M. ,  Arnaud, Elizabeth ,  Aubin, S. ,  Baumann, U. ,  Buche, P. ,  Cooper, L. ,  Cwiek-Kupczynska, H. ,  Davey, R.P. ,  Fulss, R.A. ,  Jonquet, C. ,  Laporte, M-A. ,  Larmande, Pierre ,  Pommier, C. ,  Protonotarios, V. ,  Reverte, C. ,  Shrestha, R. ,  Subirats, I. ,  Venkatesan, A. ,  Whan, A. ,  Quesneville, H. ,  [Developing data interoperability using standards: A wheat community use case] ,  Developing data interoperability using standards: A wheat community use case

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