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There are substantial limitations in our understanding of the distribution of antimicrobial resistance (AMR) in humans and livestock in developing countries. Here, we present the results of an epidemiological study examining patterns of AMR in Escherichia coli isolates circulating in sympatric hu...


Muloi, DishonKiiru, J.Ward, M.J.Hassell, James M.Bettridge, Judy M.Robinson, T.P.Bunnik, B.A.D. vanChase-Topping, M.Robertson, G.Pedersen, A.B.Fèvre, Eric M.Woolhouse, Mark E.J.Kang'ethe, Erastus K.Kariuki, S.[Epidemiology of antimicrobial-resistant Escherichia coli carriage in sympatric humans and livestock in a rapidly urbanizing city]Epidemiology of antimicrobial-resistant Escherichia coli carriage in sympatric humans and livestock in a rapidly urbanizing city

The neglected tropical diseases (NTDs) are characterized by their tendency to cluster within groups of people, typically the poorest and most marginalized. Despite this, measures of clustering, such as within-group correlation or between-group heterogeneity, are rarely reported from community-bas...


Glanville, William A. deThomas, Lian F.Cook, Elizabeth A.J.Bronsvoort, B.M. de C.Wardrop, N.Wamae, C.N.Kariuki, S.Fèvre, Eric M.[General contextual effects on neglected tropical disease risk in rural Kenya]General contextual effects on neglected tropical disease risk in rural Kenya

Tularemia is a highly contagious infectious zoonosis caused by the bacterial agent Francisella tularensis. The aim of this study was to investigate the presence of antibodies to Francisella tularensis in febrile patients in northeastern Kenya. During 2014-2015, 730 patients were screened for anti...


Njeru, J.Tomaso, H.Mertens, K.Henning, K.Wareth, G.Heller, R.Kariuki, S.Fèvre, Eric M.Neubauer, H.Pletz, M.W.[Serological evidence of Francisella tularensis in febrile patients seeking treatment at remote hospitals, Northeastern Kenya, 2014-2015]Serological evidence of Francisella tularensis in febrile patients seeking treatment at remote hospitals, Northeastern Kenya, 2014-2015

Land-use change is predicted to act as a driver of zoonotic disease emergence through human exposure to novel microbial diversity, but evidence for the effects of environmental change on microbial communities in vertebrates is lacking. We sample wild birds at 99 wildlife-livestock-human interface...


Hassell, J.M.Ward, M.J.Muloi, D.Bettridge, Judy M.Phan, H.Robinson, T.P.Ogendo, A.Imboma, T.Kiiru, J.Kariuki, S.Begon, M.Kang'ethe, Erastus K.Woolhouse, Mark E.J.Fèvre, Eric M.[Deterministic processes structure bacterial genetic communities across an urban landscape]Deterministic processes structure bacterial genetic communities across an urban landscape

The importance of household socio-economic position (SEP) in shaping individual infectious disease risk is increasingly recognised, particularly in low income settings. However, few studies have measured the extent to which this association is consistent for the range of pathogens that are typica...


Glanville, William A. deThomas, L.F.Cook, Elizabeth A.J.Bronsvoort, B.M. de C.Wamae, N.C.Kariuki, S.Fèvre, Eric M.[Household socio-economic position and individual infectious disease risk in rural Kenya]Household socio-economic position and individual infectious disease risk in rural Kenya

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