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Report 2018

Phenotype Ontologies Traversing All The Organisms (POTATO) workshop aims to reconcile logical definitions across species. Workshop Report

Autor: Matentzoglu, N. Balhoff, J. Bello, S. Boerkoel, C. Bradford, Y. Carmody, L. Cooper, L. Grove, C. Harris, N. Köhler, S. Laporte, M-A. Laulederkind, S. Lee, R. Mazandu, G. McMurry, J. Mungall, C. Osumi-Sutherland, D. Pilgrim, C. Rageth, K. Robb, S. Robinson, P. Segerdell, E. Thessen, A. Vasilevsky, N. Zhang, X. Haendel, M.

Logical definitions, in particular those following the Entity-Quality approach, are increasingly used to drive automated classification of phenotypes and integrate phenotypes across species semantically. Over the years, the lack of consistent and widespread use of common standards resulted in con...

Enlace original: https://cgspace.cgiar.org/handle/10568/100816

Investigación en Agricultura

ONTOLOGY

PHENOTYPES

DATA PROCESSING

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Matentzoglu, N. , Balhoff, J. , Bello, S. , Boerkoel, C. , Bradford, Y. , Carmody, L. , Cooper, L. , Grove, C. , Harris, N. , Köhler, S. , Laporte, M-A. , Laulederkind, S. , Lee, R. , Mazandu, G. , McMurry, J. , Mungall, C. , Osumi-Sutherland, D. , Pilgrim, C. , Rageth, K. , Robb, S. , Robinson, P. , Segerdell, E. , Thessen, A. , Vasilevsky, N. , Zhang, X. , Haendel, M. , [Phenotype Ontologies Traversing All The Organisms (POTATO) workshop aims to reconcile logical definitions across species. Workshop Report] , Phenotype Ontologies Traversing All The Organisms (POTATO) workshop aims to reconcile logical definitions across species. Workshop Report

Conference Paper 2018

A Natural Language Processing Pipeline to extract phenotypic data from formal taxonomic descriptions with a focus on flagellate plants

Autor: Endara L. Burleigh G. Cooper L. Jaiswal, P. Laporte, M-A.

Assembling large-scale phenotypic datasets for evolutionary and biodiversity studies of plants can be extremely difficult and time consuming. New semi-automated Natural Language Processing (NLP) pipelines can extract phenotypic data from taxonomic descriptions, and their performance can be enhanc...

Enlace original: https://cgspace.cgiar.org/handle/10568/100813

Investigación en Agricultura

DATA PROCESSING

ONTOLOGY

TAXONOMY

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Endara L. , Burleigh G. , Cooper L. , Jaiswal, P. , Laporte, M-A. , [A Natural Language Processing Pipeline to extract phenotypic data from formal taxonomic descriptions with a focus on flagellate plants] , A Natural Language Processing Pipeline to extract phenotypic data from formal taxonomic descriptions with a focus on flagellate plants

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Resultados de búsqueda

Phenotype Ontologies Traversing All The Organisms (POTATO) workshop aims to reconcile logical definitions across species. Workshop Report

A Natural Language Processing Pipeline to extract phenotypic data from formal taxonomic descriptions with a focus on flagellate plants

Descubre y comparte nuestro conocimiento público

Resultados de búsqueda

Phenotype Ontologies Traversing All The Organisms (POTATO) workshop aims to reconcile logical definitions across species. Workshop Report

[Phenotype_Matentzoglu_2018.pdf]

A Natural Language Processing Pipeline to extract phenotypic data from formal taxonomic descriptions with a focus on flagellate plants

[A natural_Endara_2018.pdf]