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Logical definitions, in particular those following the Entity-Quality approach, are increasingly used to drive automated classification of phenotypes and integrate phenotypes across species semantically. Over the years, the lack of consistent and widespread use of common standards resulted in con...


Matentzoglu, N.Balhoff, J.Bello, S.Boerkoel, C.Bradford, Y.Carmody, L.Cooper, L.Grove, C.Harris, N.Köhler, S.Laporte, M-A.Laulederkind, S.Lee, R.Mazandu, G.McMurry, J.Mungall, C.Osumi-Sutherland, D.Pilgrim, C.Rageth, K.Robb, S.Robinson, P.Segerdell, E.Thessen, A.Vasilevsky, N.Zhang, X.Haendel, M.[Phenotype Ontologies Traversing All The Organisms (POTATO) workshop aims to reconcile logical definitions across species. Workshop Report]Phenotype Ontologies Traversing All The Organisms (POTATO) workshop aims to reconcile logical definitions across species. Workshop Report

Assembling large-scale phenotypic datasets for evolutionary and biodiversity studies of plants can be extremely difficult and time consuming. New semi-automated Natural Language Processing (NLP) pipelines can extract phenotypic data from taxonomic descriptions, and their performance can be enhanc...


Endara L.Burleigh G.Cooper L.Jaiswal, P.Laporte, M-A.[A Natural Language Processing Pipeline to extract phenotypic data from formal taxonomic descriptions with a focus on flagellate plants]A Natural Language Processing Pipeline to extract phenotypic data from formal taxonomic descriptions with a focus on flagellate plants

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