Descubre y comparte nuestro conocimiento público

Se han encontrado 10 recursos

Resultados de búsqueda

Journal Article 2017

Autor: Jonquet, C. Toulet, A. Arnaud, Elizabeth Aubin, S. Dzale-Yeumo, E. Emonet, V. Graybeal, J. Laporte, M-A. Musen, M.A. Pesce, V. Larmande, Pierre

Many vocabularies and ontologies are produced to represent and annotate agronomic data. However, those ontologies are spread out, in different formats, of different size, with different structures and from overlapping domains. Therefore, there is need for a common platform to receive and host the...

Enlace original: https://cgspace.cgiar.org/handle/10568/89904

Investigación en Agricultura
Enlace permanente

Jonquet, C. ,  Toulet, A. ,  Arnaud, Elizabeth ,  Aubin, S. ,  Dzale-Yeumo, E. ,  Emonet, V. ,  Graybeal, J. ,  Laporte, M-A. ,  Musen, M.A. ,  Pesce, V. ,  Larmande, Pierre ,  [AgroPortal: a vocabulary and ontology repository for agronomy] ,  AgroPortal: a vocabulary and ontology repository for agronomy
Poster 2014

Autor: Rouard, M. Dereeper, A. Droc, Gaëtan Sarah, G. Dufayard, Jean-François Guignon, V. Hamelin, C. Homa, F. Lamotte, F. de Larmande, Pierre Lariviere, D. Sabot, F. Sempere, G. Summo, M. Pitollat, B. This, D. Bocs, S. Ruiz, M.
Enlace original: https://cgspace.cgiar.org/handle/10568/67546

Investigación en Agricultura
Enlace permanente

Rouard, M. ,  Dereeper, A. ,  Droc, Gaëtan ,  Sarah, G. ,  Dufayard, Jean-François ,  Guignon, V. ,  Hamelin, C. ,  Homa, F. ,  Lamotte, F. de ,  Larmande, Pierre ,  Lariviere, D. ,  Sabot, F. ,  Sempere, G. ,  Summo, M. ,  Pitollat, B. ,  This, D. ,  Bocs, S. ,  Ruiz, M. ,  [The South Green Bioinformatics platform] ,  The South Green Bioinformatics platform
Journal Article 2016

Autor: Sempere, Guilhem Philippe, Florian Dereeper, Alexis Ruiz, Manuel Sarah, Gautier Larmande, Pierre

BACKGROUND: Exploring the structure of genomes and analyzing their evolution is essential to understanding the ecological adaptation of organisms. However, with the large amounts of data being produced by next-generation sequencing, computational challenges arise in terms of storage, search, shar...

Enlace original: https://cgspace.cgiar.org/handle/10568/75712

Investigación en Agricultura
Enlace permanente

Sempere, Guilhem ,  Philippe, Florian ,  Dereeper, Alexis ,  Ruiz, Manuel ,  Sarah, Gautier ,  Larmande, Pierre ,  [Gigwa—Genotype investigator for genomewide analyses] ,  Gigwa—Genotype investigator for genomewide analyses
Journal Article 2008

Autor: Larmande, Pierre Gay, C Lorieux, M Perin, C Bouniol, M Droc, Gaëtan Sallaud, C Pérez, P. Barnola, I Biderre-Petit, Corinne Martin, J Morel, Jean-Benoit Johnson, Alexander A.T. Bourgis, Fabienne Ghesquière, Alain Ruiz, ME Courtois, Brigitte Guiderdoni, Emmanuel

To organize data resulting from the phenotypic characterization of a library of 30 000 T-DNA enhancer trap (ET) insertion lines of rice (Oryza sativa L cv. Nipponbare), we developed the Oryza Tag Line (OTL) database (http://urgi.versailles.inra.fr/OryzaTagLine/). OTL structure facilitates forward...

Enlace original: https://cgspace.cgiar.org/handle/10568/43916

Investigación en Agricultura
Enlace permanente
Larmande, Pierre ,  Gay, C ,  Lorieux, M ,  Perin, C ,  Bouniol, M ,  Droc, Gaëtan ,  Sallaud, C ,  Pérez, P. ,  Barnola, I ,  Biderre-Petit, Corinne ,  Martin, J ,  Morel, Jean-Benoit ,  Johnson, Alexander A.T. ,  Bourgis, Fabienne ,  Ghesquière, Alain ,  Ruiz, ME ,  Courtois, Brigitte ,  Guiderdoni, Emmanuel ,  [Oryza tag line, a phenotypic mutant database for the génoplante rice insertion line library] ,  Oryza tag line, a phenotypic mutant database for the génoplante rice insertion line library
Journal Article 2013

Autor: Al-Tam, F. Adam, H. Anjos, A. dos Lorieux, Mathias Larmande, Pierre Ghesquière, Alain Jouannic, Stefan Reza Shahbazkia, H
Enlace original: https://cgspace.cgiar.org/handle/10568/51405

Investigación en Agricultura
Enlace permanente
Al-Tam, F. ,  Adam, H. ,  Anjos, A. dos ,  Lorieux, Mathias ,  Larmande, Pierre ,  Ghesquière, Alain ,  Jouannic, Stefan ,  Reza Shahbazkia, H ,  [P-TRAP: A panicle trait phenotyping tool] ,  P-TRAP: A panicle trait phenotyping tool
Conference Paper 2016

Autor: Jonquet, C. Dzale-Yeumo, E. Arnaud, Elizabeth Larmande, Pierre Toulet, A. Laporte, M-A.

Our project is to develop and support a reference ontology repository for the agronomic domain. By reusing the NCBO BioPortal technology, we have already designed and implemented a prototype ontology repository for plants and a few crops. We plan to turn that prototype into a real service to the ...

Enlace original: https://cgspace.cgiar.org/handle/10568/78753

Investigación en Agricultura
Enlace permanente
Jonquet, C. ,  Dzale-Yeumo, E. ,  Arnaud, Elizabeth ,  Larmande, Pierre ,  Toulet, A. ,  Laporte, M-A. ,  [AgroPortal: a proposition for ontology-based services in the agronomic domain] ,  AgroPortal: a proposition for ontology-based services in the agronomic domain
Poster 2016

Autor: Jonquet, C. Dzale-Yeumo, E. Arnaud, Elizabeth Larmande, Pierre Toulet, A. Laporte, M-A.
Enlace original: https://cgspace.cgiar.org/handle/10568/78752

Investigación en Agricultura
Enlace permanente

Jonquet, C. ,  Dzale-Yeumo, E. ,  Arnaud, Elizabeth ,  Larmande, Pierre ,  Toulet, A. ,  Laporte, M-A. ,  [AgroPortal: a proposition for ontology-based services in the agronomic domain] ,  AgroPortal: a proposition for ontology-based services in the agronomic domain
Conference Paper 2016

Autor: Jonquet, C. Toulet, A. Arnaud, Elizabeth Aubin, S. Dzale-Yeumo, E. Emonet, V. Graybeal, J. Musen, M.A. Pommier, C. Larmande, Pierre

Many vocabularies and ontologies are produced to represent and annotate agronomic data. By reusing the NCBO BioPortal technology, we have already designed and implemented an advanced prototype ontology repository for the agronomy domain. We plan to turn that prototype into a real service to the c...

Enlace original: https://cgspace.cgiar.org/handle/10568/78778

Investigación en Agricultura
Enlace permanente

Jonquet, C. ,  Toulet, A. ,  Arnaud, Elizabeth ,  Aubin, S. ,  Dzale-Yeumo, E. ,  Emonet, V. ,  Graybeal, J. ,  Musen, M.A. ,  Pommier, C. ,  Larmande, Pierre ,  [Reusing the NCBO BioPortal technology for agronomy to build AgroPortal] ,  Reusing the NCBO BioPortal technology for agronomy to build AgroPortal
Journal Article 2012

Autor: Lorieux, Mathias Blein, Mélisande Lozano, Jaime Bouniol, Matthieu Droc, Gaëtan Diévart, Anne Périn, Christophe Mieulet, Delphine Lanau, Nadege Bès, Martine Rouvière, Claire Gay, Céline Piffanelli, Pietro Larmande, Pierre Michel, Corinne Barnola, Isabelle Biderre-Petit, Corinne Sallaud, Christophe Pérez, Pascual Bourgis, Fabienne Ghesquière, Alain Gantet, Pascual Tohme, Joseph M. Morel, Jean-Benoit Guiderdoni, Emmanuel

We report here the molecular and phenotypic features of a library of 31 562 insertion lines generated in the model japonica cultivar Nipponbare of rice (Oryza sativa L.), called Oryza Tag Line (OTL). Sixteen thousand eight hundred and fourteen T‐DNA and 12 410 Tos17 discrete insertion sites have ...

Enlace original: https://cgspace.cgiar.org/handle/10568/88270

Investigación en Agricultura
Enlace permanente
Lorieux, Mathias ,  Blein, Mélisande ,  Lozano, Jaime ,  Bouniol, Matthieu ,  Droc, Gaëtan ,  Diévart, Anne ,  Périn, Christophe ,  Mieulet, Delphine ,  Lanau, Nadege ,  Bès, Martine ,  Rouvière, Claire ,  Gay, Céline ,  Piffanelli, Pietro ,  Larmande, Pierre ,  Michel, Corinne ,  Barnola, Isabelle ,  Biderre-Petit, Corinne ,  Sallaud, Christophe ,  Pérez, Pascual ,  Bourgis, Fabienne ,  Ghesquière, Alain ,  Gantet, Pascual ,  Tohme, Joseph M. ,  Morel, Jean-Benoit ,  Guiderdoni, Emmanuel ,  [In-depth molecular and phenotypic characterization in a rice insertion line library facilitates gene identification through reverse and forward genetics approaches] ,  In-depth molecular and phenotypic characterization in a rice insertion line library facilitates gene identification through reverse and forward genetics approaches
Journal Article 2017

Autor: Dzale-Yeumo, E. Alaux, M. Arnaud, Elizabeth Aubin, S. Baumann, U. Buche, P. Cooper, L. Cwiek-Kupczynska, H. Davey, R.P. Fulss, R.A. Jonquet, C. Laporte, M-A. Larmande, Pierre Pommier, C. Protonotarios, V. Reverte, C. Shrestha, R. Subirats, I. Venkatesan, A. Whan, A. Quesneville, H.

In this article, we present a joint effort of the wheat research community, along with data and ontology experts, to develop wheat data interoperability guidelines. Interoperability is the ability of two or more systems and devices to cooperate and exchange data, and interpret that shared informa...

Enlace original: https://cgspace.cgiar.org/handle/10568/89854

Investigación en Agricultura
Enlace permanente

Dzale-Yeumo, E. ,  Alaux, M. ,  Arnaud, Elizabeth ,  Aubin, S. ,  Baumann, U. ,  Buche, P. ,  Cooper, L. ,  Cwiek-Kupczynska, H. ,  Davey, R.P. ,  Fulss, R.A. ,  Jonquet, C. ,  Laporte, M-A. ,  Larmande, Pierre ,  Pommier, C. ,  Protonotarios, V. ,  Reverte, C. ,  Shrestha, R. ,  Subirats, I. ,  Venkatesan, A. ,  Whan, A. ,  Quesneville, H. ,  [Developing data interoperability using standards: A wheat community use case] ,  Developing data interoperability using standards: A wheat community use case

Selecciona los documentos para visualizarlos

Nombre del archivo Ver recurso
Marcar todos
Limpiar todo