Descubre y comparte nuestro conocimiento público

Se han encontrado 6 recursos

Resultados de búsqueda

Many vocabularies and ontologies are produced to represent and annotate agronomic data. However, those ontologies are spread out, in different formats, of different size, with different structures and from overlapping domains. Therefore, there is need for a common platform to receive and host the...


Jonquet, C.Toulet, A.Arnaud, ElizabethAubin, S.Dzale-Yeumo, E.Emonet, V.Graybeal, J.Laporte, M-A.Musen, M.A.Pesce, V.Larmande, Pierre[AgroPortal: a vocabulary and ontology repository for agronomy]AgroPortal: a vocabulary and ontology repository for agronomy

BACKGROUND: Exploring the structure of genomes and analyzing their evolution is essential to understanding the ecological adaptation of organisms. However, with the large amounts of data being produced by next-generation sequencing, computational challenges arise in terms of storage, search, shar...


Sempere, GuilhemPhilippe, FlorianDereeper, AlexisRuiz, ManuelSarah, GautierLarmande, Pierre[Gigwa—Genotype investigator for genomewide analyses]Gigwa—Genotype investigator for genomewide analyses

To organize data resulting from the phenotypic characterization of a library of 30 000 T-DNA enhancer trap (ET) insertion lines of rice (Oryza sativa L cv. Nipponbare), we developed the Oryza Tag Line (OTL) database (http://urgi.versailles.inra.fr/OryzaTagLine/). OTL structure facilitates forward...


Larmande, PierreGay, CLorieux, MPerin, CBouniol, MDroc, GaëtanSallaud, CPérez, P.Barnola, IBiderre-Petit, CorinneMartin, JMorel, Jean-BenoitJohnson, Alexander A.T.Bourgis, FabienneGhesquière, AlainRuiz, MECourtois, BrigitteGuiderdoni, Emmanuel[Oryza tag line, a phenotypic mutant database for the génoplante rice insertion line library]Oryza tag line, a phenotypic mutant database for the génoplante rice insertion line library
Al-Tam, F.Adam, H.Anjos, A. dosLorieux, MathiasLarmande, PierreGhesquière, AlainJouannic, StefanReza Shahbazkia, H[P-TRAP: A panicle trait phenotyping tool]P-TRAP: A panicle trait phenotyping tool
Lorieux, MathiasBlein, MélisandeLozano, JaimeBouniol, MatthieuDroc, GaëtanDiévart, AnnePérin, ChristopheMieulet, DelphineLanau, NadegeBès, MartineRouvière, ClaireGay, CélinePiffanelli, PietroLarmande, PierreMichel, CorinneBarnola, IsabelleBiderre-Petit, CorinneSallaud, ChristophePérez, PascualBourgis, FabienneGhesquière, AlainGantet, PascualTohme, Joseph M.Morel, Jean-BenoitGuiderdoni, Emmanuel[In-depth molecular and phenotypic characterization in a rice insertion line library facilitates gene identification through reverse and forward genetics approaches]In-depth molecular and phenotypic characterization in a rice insertion line library facilitates gene identification through reverse and forward genetics approaches

In this article, we present a joint effort of the wheat research community, along with data and ontology experts, to develop wheat data interoperability guidelines. Interoperability is the ability of two or more systems and devices to cooperate and exchange data, and interpret that shared informa...


Dzale-Yeumo, E.Alaux, M.Arnaud, ElizabethAubin, S.Baumann, U.Buche, P.Cooper, L.Cwiek-Kupczynska, H.Davey, R.P.Fulss, R.A.Jonquet, C.Laporte, M-A.Larmande, PierrePommier, C.Protonotarios, V.Reverte, C.Shrestha, R.Subirats, I.Venkatesan, A.Whan, A.Quesneville, H.[Developing data interoperability using standards: A wheat community use case]Developing data interoperability using standards: A wheat community use case

Selecciona los documentos para visualizarlos

Nombre del archivo Ver recurso