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GnpIS is a data repository for plant phenomics that stores whole field and greenhouse experimental data including environment measures. It allows long-term access to datasets following the FAIR principles: Findable, Accessible, Interoperable, and Reusable, by using a flexible and original approac...


Pommier, C.Michotey, C.Cornut, G.Roumet, P.Duchêne, E.Flores, R.Lebreton, A.Alaux, M.Durand, S.Kimmel, E.Letellier, T.Merceron, G.Laine, M.Guerche, C.Loaec, M.Steinbach, D.Laporte, M-A.Arnaud, ElizabethQuesneville, H.Adam-Blondon, Anne-Françoise[Applying FAIR Principles to plant phenotypic data management in GnpIS]Applying FAIR Principles to plant phenotypic data management in GnpIS

Phenotype data are collected in trials conducted by experimental facilities including multilocal field networks and high throughput phenotyping facilities in controlled environments or fields. A given germplasm panel can therefore have been phenotyped in very different conditions and using very d...


Pommier, C.Alaux, M.Letellier, T.Michotey, C.Cornut, G.Lebreton, A.Labernadiere, M.Laine, M.Arnaud, ElizabethAdam-Blondon, Anne-FrançoiseQuesneville, H.[GnpIS-Ephesis, the phenotypic data integration platform for INRA networks experimental data – data discovery and dataset building use cases]GnpIS-Ephesis, the phenotypic data integration platform for INRA networks experimental data – data discovery and dataset building use cases

The BioMart Community Portal (www.biomart.org) is a community-driven effort to provide a unified interface to biomedical databases that are distributed worldwide. The portal provides access to numerous database projects supported by 30 scientific organizations. It includes over 800 different biol...


Smedley, D.Haider, S.Durinck, S.Pandini, L.Provero, P.Allen, J.Arnaiz, O.Hamza Awedh, M.Baldock, R.Barbiera, R.Bardou, P.Beck, T.Blake, A.Bonierbale, Merideth W.Brookes, A.J.Bucci, G.Buetti, I.Burge, S.Cabau, C.Carlson, J.W.Chelala, C.Chrysostomou, C.Cittaro, C.Collin, O.Córdova, R.Cutts, R.J.Dassi, E.Genova, A. diDjari, A.Esposito, A.Estrella, H.Eyras, E.Fernández Banet, J.Forbes, S.Free, R.C.Fujisawa, T.Gadaleta, M.García Manteiga, J.M.Goodstein, D.Gray, K.Guerra-Assuncao, J.A.Haggarty, B.Han, D.J.Han, B.W.Harris, T.Harshbarger, J.Hastings, R.K.Hayes, R.D.Hoede, C.Hu, S.Hu, Z.l.Hutchins, L.Kan, Z.Kawaji, H.Keliet, A.Kerhornou, A.Kim, S.Kinsella, R.Klopp, C.Kong, L.Lawson, D.Lazarevic, D.Lee, J.H.Letellier, T.Li, C.Y.Luo, J.Maas, A.Mariette, J.Maurel, T.Merella, S.Mohamed, A.M.Moreews, F.Nabihoudine, I.Ndegwa, N.Noirot, C.Pérez Llamas, C.Primig, M.Quattrone, A.Quesneville, H.Rambaldi, D.Reecy, J.Riba, M.Rosanoff, S.Ali Saddiq, A.Salas, A.Sallou, O.Shepherd, R.Simon, R.Sperling, L.Spooner, W.Staines, D.M.Steinbach, D.Stone, K.Stupka, E.Teague, W.Dayem Ullah, A.Z.Wang, J.Wong-Erasmus, M.Youens-Clark, K.Zadissa, A.Zhang, S.J.Kasprzyk, A.[The BioMart community portal: An innovative alternative to large, centralized data repositories.]The BioMart community portal: An innovative alternative to large, centralized data repositories.

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