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Ogawa, SatoshiValencia, Milton OrlandoLorieux, MathiasArbeláez Vélez, Juan D.McCouch, Susan R.Ishitani, ManabuGómez Selvaraj, Michael[Identification of QTLs associated with agronomic performance under nitrogen-deficient conditions using chromosome segment substitution lines of a wild rice relative, Oryza rufipogon]Identification of QTLs associated with agronomic performance under nitrogen-deficient conditions using chromosome segment substitution lines of a wild rice relative, Oryza rufipogon

Motivation: Genotyping by sequencing (GBS) generates datasets that are challenging to handle by current genetic mapping software with graphical interface. Geneticists need new user-friendly computer programs that can analyze GBS data on desktop computers. This requires improvements in computation...


Heffelfinger, ChristopherFragoso, Christopher A.Lorieux, Mathias[Constructing linkage maps in the genomics era with MapDisto 2.0]Constructing linkage maps in the genomics era with MapDisto 2.0

Spindel, JenniferWright, MarkChen, CharlesCobb, JoshuaGage, JosephHarrington, SandraLorieux, MathiasAhmadi, NourollahMcCouch, Susan[Bridging the genotyping gap: using genotyping by sequencing (GBS) to add high-density SNP markers and new value to traditional bi-parental mapping and breeding populations]Bridging the genotyping gap: using genotyping by sequencing (GBS) to add high-density SNP markers and new value to traditional bi-parental mapping and breeding populations

Describing the genetic diversity in the gene pool of crops will provide breeders with novel resources for varietal improvement. Nested Association Mapping (NAM) populations are uniquely suited for characterizing parental diversity through the shuffling and fixation of parental haplotypes. Here, w...


Fragoso, Christopher A.Moreno, MariaWang, ZuohengHeffelfinger, ChristopherArbeláez, Lady J.Aguirre, John A.Franco, NataliaRomero, Luz E.Labadie, KarineZhao, HongyuDellaporta, Stephen L.Lorieux, Mathias[Genetic Architecture of a Rice Nested Association Mapping Population]Genetic Architecture of a Rice Nested Association Mapping Population
Rebolledo, María CamilaDingkuhn, MichaelCourtois, BrigitteGibon, YClément-Vidal, ACruz, Daniel FelipeDuitama, JorgeLorieux, MathiasLuquet, D[Phenotypic and genetic dissection of component traits for early vigour in rice using plant growth modelling, sugar content analyses and association mapping]Phenotypic and genetic dissection of component traits for early vigour in rice using plant growth modelling, sugar content analyses and association mapping
Romero, Luz ElenaLozano, IvánGaravito, AndreaCarabalí, Silvio J.Triana Espinel, MónicaVillareal, NataliaReyes, LuisDuque E., Myriam CristinaMartínez, César P.Calvert, LeeLorieux, Mathias[Major QTLs control resistance to Rice hoja blanca virus and its vector Tagosodes orizicolus]Major QTLs control resistance to Rice hoja blanca virus and its vector Tagosodes orizicolus
Dufey, InésDraye, XavierLutts, StanleyLorieux, MathiasMartínez, CésarBertin, Pierre[Novel QTLs in an interspecific backcross Oryza sativa 3 Oryza glaberrima for resistance to iron toxicity in rice]Novel QTLs in an interspecific backcross Oryza sativa 3 Oryza glaberrima for resistance to iron toxicity in rice

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