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Poster 2016-01-18

Cassavabase (cassavabase.org): an integrated field breeding and genomics database enables accelerated genetic gain in cassava

Autor: Agbona, A. Kulakow, P.A. Rabbi, Ismail Y. Prasad, P. Arnaud, Elizabeth Valette, L. Angelique, M. Mueller, L. Menda, N.

Enlace original: https://cgspace.cgiar.org/handle/10568/72392

Investigación en Agricultura

CASSAVA

VARIABLE

ONTOLOGY

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Agbona, A. , Kulakow, P.A. , Rabbi, Ismail Y. , Prasad, P. , Arnaud, Elizabeth , Valette, L. , Angelique, M. , Mueller, L. , Menda, N. , [Cassavabase (cassavabase.org): an integrated field breeding and genomics database enables accelerated genetic gain in cassava] , Cassavabase (cassavabase.org): an integrated field breeding and genomics database enables accelerated genetic gain in cassava

Poster 2018

Cassavabase, an advantage for IITA cassava breeding program

Autor: Prasad, P. Agbona, A. Kulakow, P. Rabbi, Ismail Y. Egesi, Chiedozie N. Parkes, E. Aina, O. Mueller, L.

Enlace original: https://cgspace.cgiar.org/handle/10568/101676

Investigación en Agricultura

CASSAVA

MANIHOT ESCULENTA

FOOD SECURITY

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Prasad, P. , Agbona, A. , Kulakow, P. , Rabbi, Ismail Y. , Egesi, Chiedozie N. , Parkes, E. , Aina, O. , Mueller, L. , [Cassavabase, an advantage for IITA cassava breeding program] , Cassavabase, an advantage for IITA cassava breeding program

Journal Article 2014

solGS: a webbased tool for genomic selection

Autor: Tecle, I.Y. Edwards, J.D. Menda, N. Egesi, Chiedozie N. Rabbi, Ismail Y. Kulakow, P.A. Kawuki, R. Jannink, Jean-Luc Mueller, L.

Background: Genomic selection (GS) promises to improve accuracy in estimating breeding values and genetic gain for quantitative traits compared to traditional breeding methods. Its reliance on high-throughput genome-wide markers and statistical complexity, however, is a serious challenge in data ...

Enlace original: https://cgspace.cgiar.org/handle/10568/76065

Investigación en Agricultura

BIOINFORMATICS

DATABASES

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Tecle, I.Y. , Edwards, J.D. , Menda, N. , Egesi, Chiedozie N. , Rabbi, Ismail Y. , Kulakow, P.A. , Kawuki, R. , Jannink, Jean-Luc , Mueller, L. , [solGS: a webbased tool for genomic selection] , solGS: a webbased tool for genomic selection

Conference Paper 2013

In silico mapping of Conserved Ortholog Set (COS) markers in the potato genome.

Autor: Lindqvist-Kreuze, Hanele Portal, L. Rodríguez, F. Simon, R. Mueller, L. Spooner, D. Bonierbale, Merideth W.

Conserved ortholog set (COS) markers are useful for genetic mapping across diverse taxa, including the Solanaceae. We amplified over 300 COS markers from diverse set of Solanum germplasm, sequenced them and aligned into the whole genome sequence of potato. We also mapped a set of COS markers gene...

Enlace original: https://cgspace.cgiar.org/handle/10568/57035

Investigación en Agricultura

POTATOES

GENOMES

GENETIC MARKERS

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Lindqvist-Kreuze, Hanele , Portal, L. , Rodríguez, F. , Simon, R. , Mueller, L. , Spooner, D. , Bonierbale, Merideth W. , [In silico mapping of Conserved Ortholog Set (COS) markers in the potato genome.] , In silico mapping of Conserved Ortholog Set (COS) markers in the potato genome.

Conference Paper 2013

The species-specific crop ontology (Generation Challenge Programme): Application and integration into the reference plant trait ontology to enable data mining on phenotypes.

Autor: Arnaud, Elizabeth Shrestha, R. Kulakow, P.A. Bakare, M. López Montes, A. Ofodile, S. Reddy T.P. Prasad, P. Shah, Tushaar Hash, C.T. Weltzien, Eva Sissoko, I. Guerrero, A.F. Simon, R. Borja Borja, N.F. Ramil, M. Matteis, L. Skofic, M. Hazekamp, T. McLaren, G. Cooper, L. Jaiswal, P. Menda, N. Nelson, R. Grant, D. Bastow, R. Mueller, L. Rami, J.F.

The Crop Ontology (CO) of the Generation Challenge Program (GCP) (http://cropontology.org/) currently contains eleven crop-specific ontologies and has been developed for the Integrated Breeding Platform (IBP) (https://www.integratedbreeding.net/) by several CGIAR centers. The CO provides validate...

Enlace original: https://cgspace.cgiar.org/handle/10568/57036

Investigación en Agricultura

POTATOES

ONTOLOGY

PHENOTYPES

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Arnaud, Elizabeth , Shrestha, R. , Kulakow, P.A. , Bakare, M. , López Montes, A. , Ofodile, S. , Reddy T.P. , Prasad, P. , Shah, Tushaar , Hash, C.T. , Weltzien, Eva , Sissoko, I. , Guerrero, A.F. , Simon, R. , Borja Borja, N.F. , Ramil, M. , Matteis, L. , Skofic, M. , Hazekamp, T. , McLaren, G. , Cooper, L. , Jaiswal, P. , Menda, N. , Nelson, R. , Grant, D. , Bastow, R. , Mueller, L. , Rami, J.F. , [The species-specific crop ontology (Generation Challenge Programme): Application and integration into the reference plant trait ontology to enable data mining on phenotypes.] , The species-specific crop ontology (Generation Challenge Programme): Application and integration into the reference plant trait ontology to enable data mining on phenotypes.

Descubre y comparte nuestro conocimiento público

Resultados de búsqueda

Cassavabase (cassavabase.org): an integrated field breeding and genomics database enables accelerated genetic gain in cassava

Cassavabase, an advantage for IITA cassava breeding program

solGS: a webbased tool for genomic selection

In silico mapping of Conserved Ortholog Set (COS) markers in the potato genome.

The species-specific crop ontology (Generation Challenge Programme): Application and integration into the reference plant trait ontology to enable data mining on phenotypes.

Descubre y comparte nuestro conocimiento público

Resultados de búsqueda

Cassavabase (cassavabase.org): an integrated field breeding and genomics database enables accelerated genetic gain in cassava

Cassavabase, an advantage for IITA cassava breeding program

[U18ProcPrasadCassavabaseNothomNodev.pdf]

solGS: a webbased tool for genomic selection

[U14ArtTecleWebbasedInthomDev.pdf]

In silico mapping of Conserved Ortholog Set (COS) markers in the potato genome.

The species-specific crop ontology (Generation Challenge Programme): Application and integration into the reference plant trait ontology to enable data mining on phenotypes.