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Journal Article 2017-01

Autor: Yi Zheng Shan Gao Padmanabhan, C. Li, R. Galvez, M. Gutiérrez, D. Fuentes, S. Kai-Shu Ling Kreuze, J.F. Zhangjun Fei

Accurate detection of viruses in plants and animals is critical for agriculture production and human health. Deep sequencing and assembly of virus-derived small interfering RNAs has proven to be a highly efficient approach for virus discovery. Here we present VirusDetect, a bioinformatics pipelin...

Enlace original: https://cgspace.cgiar.org/handle/10568/80028

Investigación en Agricultura
RNA
Enlace permanente
Yi Zheng ,  Shan Gao ,  Padmanabhan, C. ,  Li, R. ,  Galvez, M. ,  Gutiérrez, D. ,  Fuentes, S. ,  Kai-Shu Ling ,  Kreuze, J.F. ,  Zhangjun Fei ,  [VirusDetect: an automated pipeline for efficient virus discovery using deep sequencing of small RNAs.] ,  VirusDetect: an automated pipeline for efficient virus discovery using deep sequencing of small RNAs.
Journal Article 2017-06

Autor: Niu, X. Sun, Y. Chen, Z. Li, R. Padmanabhan, C. Ruan, J. Kreuze, J.F. Ling, K.S. Fei, Z.J. Gao, S.

Small interfering RNA (siRNA) duplexes are short (usually 21 to 24 bp) double-stranded RNAs (dsRNAs) with several overhanging nucleotides at both 5'- and 3'-ends. It has been found that siRNA duplexes bind the RNA-induced silencing complex (RISC) and cleave the sense strands with endonucleases. I...

Enlace original: https://cgspace.cgiar.org/handle/10568/82687

Investigación en Agricultura
RNA
Enlace permanente
Niu, X. ,  Sun, Y. ,  Chen, Z. ,  Li, R. ,  Padmanabhan, C. ,  Ruan, J. ,  Kreuze, J.F. ,  Ling, K.S. ,  Fei, Z.J. ,  Gao, S. ,  [Using small RNA-seq data to detect siRNA duplexes induced by plant viruses.] ,  Using small RNA-seq data to detect siRNA duplexes induced by plant viruses.

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