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Common bean (Phaseolus vulgaris L.) is an important staple crop for smallholder farmers, particularly in Eastern and Southern Africa. To support common bean breeding and seed dissemination, a high throughput SNP genotyping platform with 1500 established SNP assays has been developed at a genotypi...


Raatz, BodoMukankusi, Clare MugishaLobaton, Juan DavidMale, AlanChisale, VirginiaAmsalu, BerhanuFourie, DeidreMukamuhirwa, FlorideMuimui, Kennedy K.Mutari, BruceNchimbi-Msolla, SusanNkalubo, Stanley T.Tumsa, KidaneChirwa, RowlandMaredia, Mywish K.He, Chunlin[Analyses of African common bean (Phaseolus vulgaris L.) germplasm using a SNP fingerprinting platform: diversity, quality control and molecular breeding]Analyses of African common bean (Phaseolus vulgaris L.) germplasm using a SNP fingerprinting platform: diversity, quality control and molecular breeding

Background Therecent development and availability of different genotype by sequencing (GBS) protocols provided a cost-effective approach to perform high-resolution genomic analysis of entire populations in different species. The central component of all these protocols is the digestion of the ini...


Perea, ClaudiaHoz, Juan Fernando de laCruz, Daniel FelipeLobaton, Juan DavidIzquierdo, PauloQuintero, Juan CamiloRaatz, BodoDuitama, Jorge[Bioinformatic analysis of genotype by sequencing (GBS) data with NGSEP]Bioinformatic analysis of genotype by sequencing (GBS) data with NGSEP

Gedil, M.Tripathi, L.Ghislain, M.Ferguson, M.Ndjiondjop, Marie-NoelKumar, L.Raatz, BodoBecerra López Lavelle, Luis AugustoBhattacharjee, R.Semagn, K.Ribaut, JM[Biotechnology success stories by the Consultative Group on International Agriculture Research (CGIAR) system]Biotechnology success stories by the Consultative Group on International Agriculture Research (CGIAR) system

Traits related with drought resistance in recombinant inbred lines (RILs). A set of 121 bean genotypes (111 RILs, 2 parents, 8 checks) belonging to the Mesoamerican gene pool were evaluated under field conditions with two levels of water supply (irrigated and rainfed) over three seasons. To compl...


Polanía Perdomo, José A.Rao, Idupulapati M.Cajiao V., César HernandoGrajales, Miguel A.Rivera, MarielaVelásquez, FedericoRaatz, BodoBeebe, Stephen E.[Replication Data for: Shoot and Root Traits Contribute to Drought Resistance in Recombinant Inbred Lines of MD 23-24 x SEA 5 of Common Bean]Replication Data for: Shoot and Root Traits Contribute to Drought Resistance in Recombinant Inbred Lines of MD 23-24 x SEA 5 of Common Bean

Common bean breeding in the tropics has benefited from the use of marker assisted selection to accelerate the breeding cycle. It uses individual markers previously identified to be significantly associated with targeted QTLs. However, some limitations arise when identifying and quantifying a larg...


Ariza-Suarez, Danielde la Hoz, Juan FernandoMacea, E.Mayor, V.M.Raatz, Bodo[Genomic selection on a panel of elite Andean breeding lines of common bean (Phaseolus vulgaris L.)]Genomic selection on a panel of elite Andean breeding lines of common bean (Phaseolus vulgaris L.)

Common bean is the most important grain legume for human consumption and a main nutrition source in the tropics. Because bean production is reduced by both abiotic and biotic constraints, current breeding efforts are focused on the development of improved varieties with tolerance to these stresse...


Lobaton, Juan DavidMiller, TamaraGil, JuanitaAriza, DanielHoz, Juan Fernando de laSoler Garzón, AlvaroBeebe, Stephen E.Duitama, JorgeGepts, PaulRaatz, Bodo[Data from: Resequencing of common bean identifies regions of inter-gene pool introgression and provides comprehensive resources for molecular breeding]Data from: Resequencing of common bean identifies regions of inter-gene pool introgression and provides comprehensive resources for molecular breeding

La principal causa de la baja productividad en campo es la sequía, y como la mayoría de métodos para contrarrestarle son costosos e inasequibles para los agricultores de bajos recursos, se ha encontrado que el mejoramiento genético es la opción más económica para incrementar o estabilizar la prod...


Mayor-Durán, Victor ManuelRaatz, BodoBlair, Matthew W.[Desarrollo de líneas de frijol (Phaseolus vulgaris L.) tolerante a sequía a partir de cruces inter acervo con genotipos procedentes de diferentes orígenes (Mesoamericano y Andino) = Developing of drought tolerant common bean (Phaseolus vulgaris L.) from inter genepool crosses with genotypes from different origins (Andean and Mesoamerican)]Desarrollo de líneas de frijol (Phaseolus vulgaris L.) tolerante a sequía a partir de cruces inter acervo con genotipos procedentes de diferentes orígenes (Mesoamericano y Andino) = Developing of drought tolerant common bean (Phaseolus vulgaris L.) from inter genepool crosses with genotypes from different origins (Andean and Mesoamerican)
Keller, BeatManzanares, ChloeJara, Carlos E.Lobaton, Juan DavidStuder, BrunoRaatz, Bodo[Fine-mapping of a major QTL controlling angular leaf spot resistance in common bean (Phaseolus vulgaris L.)]Fine-mapping of a major QTL controlling angular leaf spot resistance in common bean (Phaseolus vulgaris L.)

Lobaton, Juan DavidMiller, TamaraGil, JuanitaSoler Garzón, AlvaroDuitama, JorgeGepts, Paul L.Raatz, Bodo[Sequencing of common bean genotypes provides a comprehensive resources for genetic introgression studies and molecular breeding]Sequencing of common bean genotypes provides a comprehensive resources for genetic introgression studies and molecular breeding

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