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Bonierbale, Merideth W.Rabbi, Ismail Y.Mudege, Netsayi N.Arnaud, ElizabethFriedmann, M.Hershey, Clair H.[RTB Breeding community of practice and NextGen breeding clusters: foundation and planning workshop]RTB Breeding community of practice and NextGen breeding clusters: foundation and planning workshop

Tamiru, M.Natsume, S.Takagi, H.White, B.Yaegashi, H.Shimizu, M.Yoshida, K.Uemura, A.Oikawa, K.Abe, A.Urasaki, N.Matsumura, HBabil, P.Yamanaka, S.Matsumoto, R.Muranaka, S.Girma, G.López Montes, A.Gedil, M.Bhattacharjee, R.Abberton, M.T.Kumar, P.L.Rabbi, Ismail Y.Tsujimura, M.Terachi, T.Haerty, W.Corpas, M.Kamoun, S.Kahl, G.Takagi, H.Asiedu, RobertTerauchi, R.[Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination]Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination

Cassava (Manihot esculenta (L.) Crantz) is a starchy root crop cultivated in the tropics for fresh consumption and commercial processing. Dry matter content and micronutrient density, particularly of provitamin A, traits that are negatively correlated, are among the primary selection objectives i...


Rabbi, Ismail Y.Udoh, L.I.Wolfe, M.Parkes, E.Y.Gedil, Melaku ADixon, A.Ramu, P.Jannink, Jean-LucKulakow, P.A.[Genome-Wide Association Mapping of Correlated Traits in Cassava: Dry Matter and Total Carotenoid Content]Genome-Wide Association Mapping of Correlated Traits in Cassava: Dry Matter and Total Carotenoid Content

Background: Genomic selection (GS) promises to accelerate genetic gain in plant breeding programs especially for crop species such as cassava that have long breeding cycles. Practically, to implement GS in cassava breeding, it is necessary to evaluate different GS models and to develop suitable m...


Okeke, U.G.Akdemir, D.Rabbi, Ismail Y.Kulakow, P.A.Jannink, Jean-Luc[Accuracies of univariate and multivariate genomic prediction models in African cassava]Accuracies of univariate and multivariate genomic prediction models in African cassava

Compared with other reduced-representation sequencing methods, library construction for genotyping-by-sequencing (GBS) is simpler and less expensive. However, elimination of sizeselection steps results in libraries of more variable fragment size than with other reduced-re...


Hamblin, M.Rabbi, Ismail Y.[The effects of restrictionenzyme choice on properties of genotypingbysequencing libraries: a study in cassava (Manihot esculenta)]The effects of restrictionenzyme choice on properties of genotypingbysequencing libraries: a study in cassava (Manihot esculenta)

Cassava (Manihot esculenta L.) is one of the most important food crops in the tropics, but yields are far below their potential. The gene pool of cassava contains natural genetic diversity relevant to many important breeding goals, but breeding progress has been slow, partly because of insuf-fici...


Rabbi, Ismail Y.Hamblin, M.Gedil, M.Kulakow, P.A.Ferguson, M.Ikpan, A.Ly, D.Jannink, Jean-Luc[Genetic mapping using genotypingbysequencing in the clonally propagated cassava]Genetic mapping using genotypingbysequencing in the clonally propagated cassava

The availability of genomic resources can facilitate progress in plant breeding through the application of advanced molecular technologies for crop improvement. This is particularly important in the case of less researched crops such as cassava, a staple and food security crop for more than 800 m...


Ferguson, Morag E.Hearne, S.J.Close, T.J.Wanamaker, S.Moskal, W.A.Town, C.D.Young, J. deMarri, P.R.Rabbi, Ismail Y.Villiers, Etienne P. de[Identification, validation and high-throughput genotyping of transcribed gene SNPs in cassava]Identification, validation and high-throughput genotyping of transcribed gene SNPs in cassava

Striga hermonthica is a parasitic weed that poses a serious threat to the production of economically important cereals in sub-Saharan Africa. The existence of genetic diversity within and between S. hermonthica populations presents a challenge to the successful development and deployment of effec...


Unachukwu, N.N.Menkir, A.Rabbi, Ismail Y.Oluoch, M.Muranaka, S.Elzein, A.Odhiambo, G.Farombi, E.O.Gedil, M.[Genetic diversity and population structure of Striga hermonthica populations from Kenya and Nigeria]Genetic diversity and population structure of Striga hermonthica populations from Kenya and Nigeria

Cassava (Manihot esculenta Crantz) is a clonally propagated staple food crop in the tropics. Genomic selection (GS) has been implemented at three breeding institutions in Africa to reduce cycle times. Initial studies provided promising estimates of predictive abilities. Here, we expand on previou...


Wolfe, M.D.Carpio, D.P. delAlabi, O.Ezenwaka, L.C.Ikeogu, Ugochukwu N.Kayondo, I.S.Lozano, R.Okeke, U.G.Ozimati, A.A.Williams, E.Egesi, Chiedozie N.Kawuki, Robert S.Kulakow, P.A.Rabbi, Ismail Y.Jannink, Jean-Luc[Prospects for Genomic Selection in Cassava Breeding]Prospects for Genomic Selection in Cassava Breeding

Assfaw Wossen, TesfamichealAbdoulaye, TahirouAlene, A.Nguimkeu, P.Feleke, S.Rabbi, Ismail Y.Haile, M.G.Manyong, Victor M.["Estimating the productivity impacts of technology adoption in the presence of misclassification" - author response to comment]"Estimating the productivity impacts of technology adoption in the presence of misclassification" - author response to comment

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