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Accurate identification of crop cultivars is crucial in assessing the impact of crop improvement research outputs. Two commonly used identification approaches, elicitation of variety names from farmer interviews and morphological plant descriptors, have inherent uncertainty levels. Genotyping-by-...


Rabbi, Ismail Y.Kulakow, P.A.Manu-Aduening, J.A.Dankyi, Ansong A.Asibuo, James Y.Parkes, Elizabeth YAbdoulaye, TahirouGirma, GezahegnGedil, Melaku ARamu, PunnaReyes, ByronMaredia, Mywish K.[Tracking crop varieties using genotyping-by-sequencing markers: a case study using cassava (Manihot esculenta Crantz)]Tracking crop varieties using genotyping-by-sequencing markers: a case study using cassava (Manihot esculenta Crantz)
Hickey, J.M.Chiurugwi, T.Mackay, I.Powell, WayneEggen, A.Kilian, A.Jones, Christopher S.Canales, C.Grattapaglia, D.Bassi, F.Atlin, G.Gorjanc, G.Dawson, I.Rabbi, Ismail Y.Ribaut, J.M.Rutkoski, J.Benzie, John A.H.Lightner, J.Mwacharo, Joram M.Parmentier, J.Robbins, K.Skot, L.Wolfe, M.Rouard, M.Clark, M.Amer, P.Gardiner, Peter R.Hendre, P.Mrode, Raphael A.Sivasankar, ShobaRasmussen, S.Groh, S.Jackson, V.Thomas, W.Beyene, Y.[Genomic prediction unifies animal and plant breeding programs to form platforms for biological discovery]Genomic prediction unifies animal and plant breeding programs to form platforms for biological discovery

The persistent challenge of insufficient food, unbalanced nutrition, and deteriorating natural resources in the most vulnerable nations, characterized by fast population growth, calls for utilization of innovative technologies to curb constraints of crop production. Enhancing genetic gain by usin...


Gedil, M.Ferguson, M.Girma Tessema, G.Gisel, A.Stavolone, L.Rabbi, Ismail Y.[perspectives on the application of next generation sequencing to the improvement of Africa's staple food crops]perspectives on the application of next generation sequencing to the improvement of Africa's staple food crops

Breeding in the CGIAR Research Program on Roots, Tubers and Bananas (RTB) targets highly diverse biotic and abiotic constraints, whilst meeting complex end-user quality preferences to improve livelihoods of beneficiaries in developing countries. Achieving breeding targets and increasing the rate ...


Friedmann, MichaelAsfaw, AsratAnglin, Noelle L.Becerra López Lavelle, Luis AugustoBhattacharjee, RanjanaBrown, AllanCarey, EdwardFerguson, Morag E.Gemenet, DorcusLindqvist-Kreuze, HaneleRabbi, Ismail Y.Rouard, MathieuSwennen, RonyThiele, Graham[Genomics-Assisted Breeding in the CGIAR Research Program on Roots, Tubers and Bananas (RTB)]Genomics-Assisted Breeding in the CGIAR Research Program on Roots, Tubers and Bananas (RTB)

Background: Genomic selection (GS) promises to accelerate genetic gain in plant breeding programs especially for crop species such as cassava that have long breeding cycles. Practically, to implement GS in cassava breeding, it is necessary to evaluate different GS models and to develop suitable m...


Okeke, U.G.Akdemir, D.Rabbi, Ismail Y.Kulakow, P.A.Jannink, Jean-Luc[Accuracies of univariate and multivariate genomic prediction models in African cassava]Accuracies of univariate and multivariate genomic prediction models in African cassava

The advent of relatively low-cost, massively parallel, high-throughput genome sequencing and the resultant availability of high density markers are revolutionizing the ways in which molecular markers can be applied to plant breeding. With the availability of the draft cassava genome sequence, the...


Ferguson, Morag E.Rabbi, Ismail Y.Kim, D.J.Gedil, M.Becerra López Lavelle, Luis AugustoOkogbenin, Emmanuel[Molecular markers and their application to cassava breeding: past, present and future]Molecular markers and their application to cassava breeding: past, present and future

Cassava (Manihot esculenta) provides calories and nutrition for more than half a billion people. It was domesticated by native Amazonian peoples through cultivation of the wild progenitor M. esculenta ssp. flabellifolia and is now grown in tropical regions worldwide. Here we provide a high-qualit...


Bredeson, J.V.Lyons, J.B.Prochnik, S.E.Wu, G.A.Ha, C.M.Edsinger-Gonzales, E.Grimwood, J.Schmutz, J.Rabbi, Ismail Y.Egezi, C.Nauluvula, P.Lebot, V.Ndunguru, J.Mkamilo, G.S.Bart, R.S.Setter, T.L.Gleadow, R.M.Kulakow, P.A.Ferguson, M.Rounsley, S.Rokhsar, D.S.[Sequencing wild and cultivated cassava and related species reveals extensive interspecific hybridization and genetic diversity]Sequencing wild and cultivated cassava and related species reveals extensive interspecific hybridization and genetic diversity

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