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To explore the transcriptomic global response to osmotic stress in roots, 18 mRNA-seq libraries were generated from three triploid banana genotypes grown under mild osmotic stress (5% PEG) and control conditions. Illumina sequencing produced 568 million high quality reads, of which 70–84% were ma...


Zorrilla-Fontanesi, Y.Rouard, M.Cenci, A.Kissel, E.Do, H.Dubois, E.Nidelet, S.Roux, N.Swennen, R.L.Carpentier, S.C.[Differential root transcriptomics in a polyploid non-model crop: the importance of respiration during osmotic stress]Differential root transcriptomics in a polyploid non-model crop: the importance of respiration during osmotic stress

Zorrilla-Fontanesi, Y.Kissel, E.Rouard, M.Cenci, A.Roux, N.Swennen, R.L.Carpentier, S.[Identification of drought responsive genes and promoters in Musa by using RNA-seq]Identification of drought responsive genes and promoters in Musa by using RNA-seq

Hueber, Y.Hribova, E.Houwe, I. van denRoux, N.Rouard, M.Sardos, J.[Application of NGS-generated SNP data to complex crops studies: the example of Musa spp. (banana).]Application of NGS-generated SNP data to complex crops studies: the example of Musa spp. (banana).

This study aims to understand the genetic diversity of traditional Oceanian starchy bananas in order to propose an efficient conservation strategy for these endangered varieties. SSR and DArT molecular markers are used to characterize a large sample of Pacific accessions, from New Guinea to Tahit...


Kagy, V.Wong, M.Vandenbroucke, H.Jenny, C.Dubois, C.Ollivier, A.Cardi, C.Mournet, P.Tuia, V.S.Roux, N.Doležel, JaroslavPerrier, X.[Traditional banana diversity in Oceania: an endangered heritage]Traditional banana diversity in Oceania: an endangered heritage

Zorrilla-Fontanesi, Y.Wesemael, J. vanKissel, E.Mduma, H.Uwimana, B.Rouard, M.Cenci, A.Roux, N.Swennen, R.L.Carpentier, S.[Combined phenotypic and transcriptomic approaches to evaluate drought-stress response in banana (Musa spp.), a non-model crop]Combined phenotypic and transcriptomic approaches to evaluate drought-stress response in banana (Musa spp.), a non-model crop

Cenci, A.Zorrilla-Fontanesi, J.Kissel, E.Hueber, Y.Dubois, E.Parrinello, H.Swennen, R.L.Roux, N.Rouard, M.Carpentier, S.[Transcriptomic analysis in banana cultivars during an early stage of drought-stress]Transcriptomic analysis in banana cultivars during an early stage of drought-stress

Drought is a complex phenomenon that is relevant for many crops. Performing high-throughput transcriptomics in non-model crops is challenging. The non-model crop where our workflow has been tested on is banana (Musa spp.), which ranks among the top ten staple foods (total production over 145 mill...


Zorrilla-Fontanesi, Y.Rouard, M.Cenci, A.Kissel, E.Roux, N.Swennen, R.L.Carpentier, S.C.[How do roots respond to osmotic stress? A transcriptomic approach to address this question in a non-model crop]How do roots respond to osmotic stress? A transcriptomic approach to address this question in a non-model crop

Guignon, V.Ruas, M.Droc, GaëtanDereeper, A.Sardos, J.Hueber, Y.Roux, N.Rouard, M.[Managing banana genetic resources and genomic information with the triplet Drupal/Tripal/Chado]Managing banana genetic resources and genomic information with the triplet Drupal/Tripal/Chado

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