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Journal Article 2016

Autor: Sempere, Guilhem Philippe, Florian Dereeper, Alexis Ruiz, Manuel Sarah, Gautier Larmande, Pierre

BACKGROUND: Exploring the structure of genomes and analyzing their evolution is essential to understanding the ecological adaptation of organisms. However, with the large amounts of data being produced by next-generation sequencing, computational challenges arise in terms of storage, search, shar...

Enlace original: https://cgspace.cgiar.org/handle/10568/75712

Investigación en Agricultura
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Sempere, Guilhem ,  Philippe, Florian ,  Dereeper, Alexis ,  Ruiz, Manuel ,  Sarah, Gautier ,  Larmande, Pierre ,  [Gigwa—Genotype investigator for genomewide analyses] ,  Gigwa—Genotype investigator for genomewide analyses
Journal Article 2015

Autor: Dereeper, Alexis Homa, Felix Andres, Gwendoline Sempere, Guilhem Sarah, Gautier Hueber, Yann Dufayard, Jean-François Ruiz, Manuel
Enlace original: https://cgspace.cgiar.org/handle/10568/67422

Investigación en Agricultura
Enlace permanente
Dereeper, Alexis ,  Homa, Felix ,  Andres, Gwendoline ,  Sempere, Guilhem ,  Sarah, Gautier ,  Hueber, Yann ,  Dufayard, Jean-François ,  Ruiz, Manuel ,  [SNiPlay3: a web-based application for exploration and large scale analyses of genomic variations] ,  SNiPlay3: a web-based application for exploration and large scale analyses of genomic variations
Journal Article 2016-07-06

Autor: Sarah, Gautier Homa, Felix Pointet, Stéphanie Contreras, Sandy Sabot, François Nabholz, Benoit Santoni, Sylvain Sauné, Laure Ardisson, Morgane Chantret, Nathalie Sauvage, Christopher Tregear, James Jourda, Cyril Pot, David Vigouroux, Yves Chair, Hana Scarcelli, Nora Billot, Claire Yahiaoui, Nabila Bacilieri, Roberto Khadari, Bouchaib Boccara, Michel Barnaud, Adéline Péros, Jean-Pierre Labouisse, Jean-Pierre Pham, Jean-Louis David, Jacques Glémin, Sylvain Ruiz, Manuel

We produced a unique large dataset of reference transcriptomes to obtain new knowledge about the evolution of plant genomes and crop domestication. For this purpose we validated a RNA-Seq data assembly protocol to perform comparative population genomics. For the validation, we assessed and compar...

Enlace original: https://cgspace.cgiar.org/handle/10568/76382

Investigación en Agricultura
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Sarah, Gautier ,  Homa, Felix ,  Pointet, Stéphanie ,  Contreras, Sandy ,  Sabot, François ,  Nabholz, Benoit ,  Santoni, Sylvain ,  Sauné, Laure ,  Ardisson, Morgane ,  Chantret, Nathalie ,  Sauvage, Christopher ,  Tregear, James ,  Jourda, Cyril ,  Pot, David ,  Vigouroux, Yves ,  Chair, Hana ,  Scarcelli, Nora ,  Billot, Claire ,  Yahiaoui, Nabila ,  Bacilieri, Roberto ,  Khadari, Bouchaib ,  Boccara, Michel ,  Barnaud, Adéline ,  Péros, Jean-Pierre ,  Labouisse, Jean-Pierre ,  Pham, Jean-Louis ,  David, Jacques ,  Glémin, Sylvain ,  Ruiz, Manuel ,  [A large set of 26 new reference transcriptomes dedicated to comparative population genomics in crops and wild relatives] ,  A large set of 26 new reference transcriptomes dedicated to comparative population genomics in crops and wild relatives

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