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Simon, R.Hualla, V.Córdova, R.Eyzaguirre, R.Flores, M.Salas, E.Bonierbale, Merideth W.[Advances in a breeding information platform for potato and sweetpotato.]Advances in a breeding information platform for potato and sweetpotato.

Sweetpotato, the seventh most important food crop worldwide, is valued for combating hunger, malnutrition, and poverty because of its hardy nature, wide adaptability, and tolerance to abiotic stresses. Cultivated sweetpotato is hexaploid (2n = 6x = 90) and due to the complexity of its genome, it ...


Khan, A.David, M.Simon, R.Díaz, F.Eyzaguirre, R.Wolfgang, G.[23. International Plant & Animal Genome Conference. San Diego, California (USA). 10-14 Jan 2015.][GBS for Ipomoea trifida: A next generation marker system for sweetpotatoes]GBS for Ipomoea trifida: A next generation marker system for sweetpotatoes

We report the first identification of novel viruses, and sequence of an entire viral genome, by a single step of high-throughput parallel sequencing of small RNAs from diseased, as well as symptomless plants. Contigs were assembled from sequenced total siRNA from plants using small sequence assem...


Kreuze, J.F.Pérez, A.Untiveros, M.Quispe, D.Fuentes, S.Barker, I.Simon, R.[Complete viral genome sequence and discovery of novel viruses by deep sequencing of small RNAs: A generic method for diagnosis, discovery and sequencing of viruses.]Complete viral genome sequence and discovery of novel viruses by deep sequencing of small RNAs: A generic method for diagnosis, discovery and sequencing of viruses.

Sweetpotato (Ipomoea batatas (L.) Lam.), a hexaploid outcrossing crop, is an important staple and food security crop in developing countries in Africa and Asia. The availability of genomic resources for sweetpotato is in striking contrast to its importance for human nutrition. Previously existing...


Schafleitner, R.Tincopa, L.R.Palomino, O.Rossel, G.Robles, R.Alagon, R.Rivera, C.Quispe, C.Rojas, L.Pacheco, J.Solis, J.Cerna, D.Kim, J.Y.Hou, J.Simon, R.[A sweetpotato gene index established by de novo assembly of pyrosequencing and Sanger sequences and mining for gene-based microsatellite markers]A sweetpotato gene index established by de novo assembly of pyrosequencing and Sanger sequences and mining for gene-based microsatellite markers

Rossel, G.Alagon, R.Tay, D.Simon, R.Gruneberg, W.J.Schafleitner, R.[Development of a globally representative SSR marker kit for sweetpotato (Ipomoea batatas).]Development of a globally representative SSR marker kit for sweetpotato (Ipomoea batatas).

Crop ontologies have been identified under the Generation Challenge Program and at the International Potato Center (CIP) as a crucial tool for managing and analyzing crop related information. Here we report progress on applying ontological concepts on sweetpotato traits important for breeders and...


Simon, R.Hualla, V.Eyzaguirre, R.Córdova, R.Mwanga, R.O.M.Rossel, G.Gruneberg, W.J.[Progress in developing a sweetpotato ontology for breeders]Progress in developing a sweetpotato ontology for breeders

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