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Dataset 2015-05

Autor: Duitama, Jorge Silva, Alexander Sanabria, Yamid Cruz, Daniel Felipe Quintero, Constanza Ballen, Carolina Lorieux, Mathias Scheffler, Brian Farmer, Andrew Torres Castro, Edgar Alonso Oard, James Tohme, Joseph M.

Current advances in sequencing technologies and bioinformatics revealed the genomic background of rice, a staple food for the poor people, and provided the basis to develop large genomic variation databases for thousands of cultivars. Proper analysis of this massive resource is expected to give n...

Enlace original: https://cgspace.cgiar.org/handle/10568/72971

Investigación en Agricultura
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Duitama, Jorge ,  Silva, Alexander ,  Sanabria, Yamid ,  Cruz, Daniel Felipe ,  Quintero, Constanza ,  Ballen, Carolina ,  Lorieux, Mathias ,  Scheffler, Brian ,  Farmer, Andrew ,  Torres Castro, Edgar Alonso ,  Oard, James ,  Tohme, Joseph M. ,  [Data from: Whole genome sequencing of elite rice cultivars as a comprehensive information resource for marker assisted selection] ,  Data from: Whole genome sequencing of elite rice cultivars as a comprehensive information resource for marker assisted selection
Journal Article 2017

Autor: Ghneim-Herrera, Thaura Selvaraj, Michael Gomez Meynard, Donaldo Fabre, Denis Peña, Alexandra Romdhane, Walid Ben Saad, Rania Ben Ogawa, Satoshi Rebolledo, María Camila Ishitani, Manabu Tohme, Joseph M. Al-Doss, Abdullah Guiderdoni, Emmanuel Hassairi, Afif

We evaluated the yields of Oryza sativa L. ‘Nipponbare’ rice lines expressing a gene encoding an A20/AN1 domain stress-associated protein, AlSAP, from the halophyte grass Aeluropus littoralis under the control of different promoters. Three independent field trials were conducted, with drought imp...

Enlace original: https://cgspace.cgiar.org/handle/10568/81532

Investigación en Agricultura
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Ghneim-Herrera, Thaura ,  Selvaraj, Michael Gomez ,  Meynard, Donaldo ,  Fabre, Denis ,  Peña, Alexandra ,  Romdhane, Walid Ben ,  Saad, Rania Ben ,  Ogawa, Satoshi ,  Rebolledo, María Camila ,  Ishitani, Manabu ,  Tohme, Joseph M. ,  Al-Doss, Abdullah ,  Guiderdoni, Emmanuel ,  Hassairi, Afif ,  [Expression of the Aeluropus littoralis AlSAP Gene Enhances Rice Yield under Field Drought at the Reproductive Stage] ,  Expression of the Aeluropus littoralis AlSAP Gene Enhances Rice Yield under Field Drought at the Reproductive Stage
Journal Article 2016-09

Autor: Rebolledo, María Camila Peña, Alexandra L. Duitama, Jorge Cruz, Daniel Felipe Grenier, Cécile Tohme, Joseph M.

Number of spikelets per panicle (NSP) is a key trait to increase yield potential in rice (O. sativa). The architecture of the rice inflorescence which is mainly determined by the length and number of primary (PBL and PBN) and secondary (SBL and SBN) branches can influence NSP. Although several ge...

Enlace original: https://cgspace.cgiar.org/handle/10568/77207

Investigación en Agricultura
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Rebolledo, María Camila ,  Peña, Alexandra L. ,  Duitama, Jorge ,  Cruz, Daniel Felipe ,  Grenier, Cécile ,  Tohme, Joseph M. ,  [Combining image analysis,genome wide association studies and different field trials to reveal stable genetic regions related to panicle architecture and the number of spikelets per panicle in rice] ,  Combining image analysis,genome wide association studies and different field trials to reveal stable genetic regions related to panicle architecture and the number of spikelets per panicle in rice
Journal Article 2016-01-25

Autor: Trijatmiko, Kurniawan R Dueñas, Conrado Tsakirpaloglou, Nikolaos Torrizo, Lina Mae Arines, Felichi Adeva, Cheryl Balindong, Jeanette Oliva, Norman Sapasap, Maria V Borrero Correa, Jaime C. Rey, Jessica Francisco, Perigio Nelson, Andrew Nakanishi, Hiromi Lombi, Enzo Tako, Elad Glahn, Raymond P. Stangoulis, James C.R. Chadha-Mohanty, Prabhjit Johnson, Alexander A.T. Tohme, Joseph M. Barry, Gerard Slamet-Loedin, Inez H

More than two billion people are micronutrient deficient. Polished grains of popular rice varieties have concentration of approximately 2 μg g−1 iron (Fe) and 16 μg g−1 zinc (Zn). The HarvestPlus breeding programs for biofortified rice target 13 μg g−1 Fe and 28 μg g−1 Zn to reach approximately 3...

Enlace original: https://cgspace.cgiar.org/handle/10568/70994

Investigación en Agricultura
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Trijatmiko, Kurniawan R ,  Dueñas, Conrado ,  Tsakirpaloglou, Nikolaos ,  Torrizo, Lina ,  Mae Arines, Felichi ,  Adeva, Cheryl ,  Balindong, Jeanette ,  Oliva, Norman ,  Sapasap, Maria V ,  Borrero Correa, Jaime C. ,  Rey, Jessica ,  Francisco, Perigio ,  Nelson, Andrew ,  Nakanishi, Hiromi ,  Lombi, Enzo ,  Tako, Elad ,  Glahn, Raymond P. ,  Stangoulis, James C.R. ,  Chadha-Mohanty, Prabhjit ,  Johnson, Alexander A.T. ,  Tohme, Joseph M. ,  Barry, Gerard ,  Slamet-Loedin, Inez H ,  [Biofortified indica rice attains iron and zinc nutrition dietary targets in the field] ,  Biofortified indica rice attains iron and zinc nutrition dietary targets in the field
Journal Article 2015-04-29

Autor: Duitama, Jorge Silva, Alexander Sanabria, Yamid Cruz, Daniel Felipe Quintero, Constanza Ballen, Carolina Lorieux, Mathias Scheffler, Brian Farmer, Andrew Torres Castro, Edgar Alonso Oard, James Tohme, Joseph M.
Enlace original: https://cgspace.cgiar.org/handle/10568/66000

Investigación en Agricultura
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Duitama, Jorge ,  Silva, Alexander ,  Sanabria, Yamid ,  Cruz, Daniel Felipe ,  Quintero, Constanza ,  Ballen, Carolina ,  Lorieux, Mathias ,  Scheffler, Brian ,  Farmer, Andrew ,  Torres Castro, Edgar Alonso ,  Oard, James ,  Tohme, Joseph M. ,  [Whole genome sequencing of elite rice cultivars as a comprehensive information resource for marker assisted selection] ,  Whole genome sequencing of elite rice cultivars as a comprehensive information resource for marker assisted selection
Journal Article 2006

Autor: Fuentes, JL Correa Victoria, Fernando J. Escobar R, F. Prado Patiño, G.A. Aricapa, María Girlena Duque E., Myriam Cristina Tohme, Joseph M.
Enlace original: https://cgspace.cgiar.org/handle/10568/69939

Investigación en Agricultura
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Fuentes, JL ,  Correa Victoria, Fernando J. ,  Escobar R, F. ,  Prado Patiño, G.A. ,  Aricapa, María Girlena ,  Duque E., Myriam Cristina ,  Tohme, Joseph M. ,  [Tagging Pi-l(t) gene for blast resistance in rice via linkage to microsatellite markers] ,  Tagging Pi-l(t) gene for blast resistance in rice via linkage to microsatellite markers
Journal Article 2008

Autor: Fuentes, JL Correa Victoria, Fernando J. Escobar, F. Prado Patiño, G.A. Aricapa, María Girlena Duque E., Myriam Cristina Tohme, Joseph M.

The present work was conducted to identify microsatellite markers linked to the rice blast resistance gene Pi-1(t) for a marker-assisted selection program. Twenty-four primer pairs corresponding to 19 microsatellite loci were selected from the Gramene database (www. gramene.org) considering their...

Enlace original: https://cgspace.cgiar.org/handle/10568/42949

Investigación en Agricultura
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Fuentes, JL ,  Correa Victoria, Fernando J. ,  Escobar, F. ,  Prado Patiño, G.A. ,  Aricapa, María Girlena ,  Duque E., Myriam Cristina ,  Tohme, Joseph M. ,  [Identification of microsatellite markers linked to the blast resistance gene Pi-1(t) in rice] ,  Identification of microsatellite markers linked to the blast resistance gene Pi-1(t) in rice
Journal Article 2010

Autor: Soto Suárez, M. Bernal, D. González, C. Szurek, B Guyot, R Tohme, Joseph M. Verdier, Valérie

Background: Bacterial leaf blight causes significant yield losses in rice crops throughout Asia and Africa. Although both the Asian and African strains of the pathogen, Xanthomonas oryzae pv. oryzae (Xoo), induce similar symptoms, they are nevertheless genetically different, with the African stra...

Enlace original: https://cgspace.cgiar.org/handle/10568/43105

Investigación en Agricultura
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Soto Suárez, M. ,  Bernal, D. ,  González, C. ,  Szurek, B ,  Guyot, R ,  Tohme, Joseph M. ,  Verdier, Valérie ,  [In planta gene expression analysis of Xanthomonas oryzae pathovar oryzae, African strain MAI1] ,  In planta gene expression analysis of Xanthomonas oryzae pathovar oryzae, African strain MAI1
Journal Article 2008

Autor: Ghneim-Herrera, Thaura Posso Duque, D Pérez Almeida, I. Torrealba N., G.T. Pieters, AJ Martínez Racines, César Pompilio Tohme, Joseph M.

In Venezuela, pedigree analyses indicate that the rice varieties currently under cultivation are closely related. Effective breeding programs, based on knowledge of the genetic diversity of cultivars, are needed to broaden the genetic bases of rice germplasm in the country. In this study, we used...

Enlace original: https://cgspace.cgiar.org/handle/10568/43201

Investigación en Agricultura
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Ghneim-Herrera, Thaura ,  Posso Duque, D ,  Pérez Almeida, I. ,  Torrealba N., G.T. ,  Pieters, AJ ,  Martínez Racines, César Pompilio ,  Tohme, Joseph M. ,  [Assessment of genetic diversity in Venezuelan rice cultivars using simple sequence repeats markers] ,  Assessment of genetic diversity in Venezuelan rice cultivars using simple sequence repeats markers
Conference Paper 2008

Autor: Sanabria, Y Carabalí, Silvio J. Olaya, Cristian A. Martínez Racines, César Pompilio Tohme, Joseph M.
Enlace original: https://cgspace.cgiar.org/handle/10568/65474

Investigación en Agricultura
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Sanabria, Y ,  Carabalí, Silvio J. ,  Olaya, Cristian A. ,  Martínez Racines, César Pompilio ,  Tohme, Joseph M. ,  [Using molecular markers to search for wild introgressions from a relative tetraploid species into Oryza sativa L.] ,  Using molecular markers to search for wild introgressions from a relative tetraploid species into Oryza sativa L.

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