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Random forests (RF) was used to correlate spectral responses to known wet chemistry carotenoid concentrations including total carotenoid content (TCC), all-trans β-carotene (ATBC), violaxanthin (VIO), lutein (LUT), 15-cis beta-carotene (15CBC), 13-cis beta-carotene (13CBC), alpha-carotene (AC), 9...


Ikeogu, U.N.Akdemir, D.Wolfe, M.D.Okeke, U.G.Amaefula, C.Jannink, Jean-LucEgesi, Chiedozie N.[Genetic correlation, genome-wide association and genomic prediction of portable NIRS predicted carotenoids in cassava roots]Genetic correlation, genome-wide association and genomic prediction of portable NIRS predicted carotenoids in cassava roots

Introgression of alleles from wild relatives has often been adaptive in plant breeding. However, the significance of historical hybridization events in modern breeding is often not clear. Cassava (Manihot esculenta) is among the most important staple foods in the world, sustaining hundreds of mil...


Wolfe, M.D.Bauchet, G.J.Chan, A.W.Lozano, R.Ramu, P.Egesi, Chiedozie N.Kawuki, R.Kulakow, P.Rabbi, Ismail Y.Jannink, Jean-Luc[Historical introgressions from a wild relative of modern cassava improved important traits and may be under balancing selection]Historical introgressions from a wild relative of modern cassava improved important traits and may be under balancing selection

Cassava (Manihot esculenta Crantz) is a clonally propagated staple food crop in the tropics. Genomic selection (GS) has been implemented at three breeding institutions in Africa to reduce cycle times. Initial studies provided promising estimates of predictive abilities. Here, we expand on previou...


Wolfe, M.D.Carpio, D.P. delAlabi, O.Ezenwaka, L.C.Ikeogu, Ugochukwu N.Kayondo, I.S.Lozano, R.Okeke, U.G.Ozimati, A.A.Williams, E.Egesi, Chiedozie N.Kawuki, Robert S.Kulakow, P.A.Rabbi, Ismail Y.Jannink, Jean-Luc[Prospects for Genomic Selection in Cassava Breeding]Prospects for Genomic Selection in Cassava Breeding

In clonally propagated crops, non-additive genetic effects can be effectively exploited by the identification of superior genetic individuals as varieties. Cassava (Manihot esculenta Crantz) is a clonally propagated staple food crop that feeds hundreds of millions. We quantified the amount and na...


Wolfe, M.D.Kulakow, P.A.Rabbi, Ismail Y.Jannink, Jean-Luc[Marker-based estimates reveal significant non-additive effects in clonally propagated cassava (Manihot esculenta): implications for the prediction of total genetic value and the selection of varieties]Marker-based estimates reveal significant non-additive effects in clonally propagated cassava (Manihot esculenta): implications for the prediction of total genetic value and the selection of varieties

Cassava (Manihot esculenta Crantz) is a crucial, under-researched crop feeding millions worldwide, especially in Africa. Cassava mosaic disease (CMD) has plagued production in Africa for over a century. Biparental mapping studies suggest primarily a single major gene mediates resistance. To inves...


Wolfe, M.D.Rabbi, Ismail Y.Egesi, Chiedozie N.Hamblin, M.Kawuki, R.Kulakow, P.A.Lozano, R.Carpio, D.P. delRamu, P.Jannink, Jean-Luc[Genome-wide association and prediction reveals genetic architecture of cassava mosaic disease resistance and prospects for rapid genetic improvement]Genome-wide association and prediction reveals genetic architecture of cassava mosaic disease resistance and prospects for rapid genetic improvement

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