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Conference Paper 2016

Transcriptomic profiling in Musa: a look into processes affected by mild osmotic stress in the root tip

Autor: Zorrilla-Fontanesi, Y. Rouard, M. Cenci, A. Kissel, E. Do, H. Dubois, E. Nidelet, S. Roux, N. Swennen, R.L. Carpentier, S.C.

Drought stress is one of the major abiotic factors limiting banana (Musa) production. Even mild-drought conditions are responsible for considerable yield losses. We performed large-scale transcriptome sequencing using Illumina technology on root tissue of three triploid genotypes representing wel...

Enlace original: https://cgspace.cgiar.org/handle/10568/74482

Investigación en Agricultura

RNA SEQUENCE

OSMOTIC STRESS

MUSA

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Zorrilla-Fontanesi, Y. , Rouard, M. , Cenci, A. , Kissel, E. , Do, H. , Dubois, E. , Nidelet, S. , Roux, N. , Swennen, R.L. , Carpentier, S.C. , [Transcriptomic profiling in Musa: a look into processes affected by mild osmotic stress in the root tip] , Transcriptomic profiling in Musa: a look into processes affected by mild osmotic stress in the root tip

Journal Article 2019-03-27

Effect of paleopolyploidy and allopolyploidy on gene expression in banana

Autor: Cenci, A. Hueber, Y. Zorrilla-Fontanesi, Y. Wesemael, J. van Kissel, E. Gislard, M. Sardos, J. Swennen, R. Roux, N. Carpentier, S.C. Rouard, M.

Bananas (Musa spp.) are an important crop worldwide. Most modern cultivars resulted from a complex polyploidization history that comprised three whole genome duplications (WGDs) shaping the haploid Musa genome, followed by inter- and intra-specific crosses between Musa acuminata and M. balbisiana...

Enlace original: https://cgspace.cgiar.org/handle/10568/101238

Investigación en Agricultura

BANANAS

POLYPLOIDY

GENETIC STUCTURES

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Cenci, A. , Hueber, Y. , Zorrilla-Fontanesi, Y. , Wesemael, J. van , Kissel, E. , Gislard, M. , Sardos, J. , Swennen, R. , Roux, N. , Carpentier, S.C. , Rouard, M. , [Effect of paleopolyploidy and allopolyploidy on gene expression in banana] , Effect of paleopolyploidy and allopolyploidy on gene expression in banana

Journal Article 2016-03-03

Differential root transcriptomics in a polyploid non-model crop: the importance of respiration during osmotic stress

Autor: Zorrilla-Fontanesi, Y. Rouard, M. Cenci, A. Kissel, E. Do, H. Dubois, E. Nidelet, S. Roux, N. Swennen, R.L. Carpentier, S.C.

To explore the transcriptomic global response to osmotic stress in roots, 18 mRNA-seq libraries were generated from three triploid banana genotypes grown under mild osmotic stress (5% PEG) and control conditions. Illumina sequencing produced 568 million high quality reads, of which 70–84% were ma...

Enlace original: https://cgspace.cgiar.org/handle/10568/72891

Investigación en Agricultura

OSMOTIC STRESS

BANANAS

DROUGHT STRESS

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Zorrilla-Fontanesi, Y. , Rouard, M. , Cenci, A. , Kissel, E. , Do, H. , Dubois, E. , Nidelet, S. , Roux, N. , Swennen, R.L. , Carpentier, S.C. , [Differential root transcriptomics in a polyploid non-model crop: the importance of respiration during osmotic stress] , Differential root transcriptomics in a polyploid non-model crop: the importance of respiration during osmotic stress

Poster 2015

Identification of drought responsive genes and promoters in Musa by using RNA-seq

Autor: Zorrilla-Fontanesi, Y. Kissel, E. Rouard, M. Cenci, A. Roux, N. Swennen, R.L. Carpentier, S.

Enlace original: https://cgspace.cgiar.org/handle/10568/67930

Investigación en Agricultura

MUSA

BANANAS

ABIOTIC STRESS

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Zorrilla-Fontanesi, Y. , Kissel, E. , Rouard, M. , Cenci, A. , Roux, N. , Swennen, R.L. , Carpentier, S. , [Identification of drought responsive genes and promoters in Musa by using RNA-seq] , Identification of drought responsive genes and promoters in Musa by using RNA-seq

Poster 2015

Combined phenotypic and transcriptomic approaches to evaluate drought-stress response in banana (Musa spp.), a non-model crop

Autor: Zorrilla-Fontanesi, Y. Wesemael, J. van Kissel, E. Mduma, H. Uwimana, B. Rouard, M. Cenci, A. Roux, N. Swennen, R.L. Carpentier, S.

Enlace original: https://cgspace.cgiar.org/handle/10568/69474

Investigación en Agricultura

MUSA

BANANAS

PHENOTYPES

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Zorrilla-Fontanesi, Y. , Wesemael, J. van , Kissel, E. , Mduma, H. , Uwimana, B. , Rouard, M. , Cenci, A. , Roux, N. , Swennen, R.L. , Carpentier, S. , [Combined phenotypic and transcriptomic approaches to evaluate drought-stress response in banana (Musa spp.), a non-model crop] , Combined phenotypic and transcriptomic approaches to evaluate drought-stress response in banana (Musa spp.), a non-model crop

Poster 2016

How do roots respond to osmotic stress? A transcriptomic approach to address this question in a non-model crop

Autor: Zorrilla-Fontanesi, Y. Rouard, M. Cenci, A. Kissel, E. Roux, N. Swennen, R.L. Carpentier, S.C.

Drought is a complex phenomenon that is relevant for many crops. Performing high-throughput transcriptomics in non-model crops is challenging. The non-model crop where our workflow has been tested on is banana (Musa spp.), which ranks among the top ten staple foods (total production over 145 mill...

Enlace original: https://cgspace.cgiar.org/handle/10568/77311

Investigación en Agricultura

DROUGHT

CLIMATE CHANGE

ROOTS

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Zorrilla-Fontanesi, Y. , Rouard, M. , Cenci, A. , Kissel, E. , Roux, N. , Swennen, R.L. , Carpentier, S.C. , [How do roots respond to osmotic stress? A transcriptomic approach to address this question in a non-model crop] , How do roots respond to osmotic stress? A transcriptomic approach to address this question in a non-model crop

Descubre y comparte nuestro conocimiento público

Resultados de búsqueda

Transcriptomic profiling in Musa: a look into processes affected by mild osmotic stress in the root tip

Effect of paleopolyploidy and allopolyploidy on gene expression in banana

Differential root transcriptomics in a polyploid non-model crop: the importance of respiration during osmotic stress

Identification of drought responsive genes and promoters in Musa by using RNA-seq

Combined phenotypic and transcriptomic approaches to evaluate drought-stress response in banana (Musa spp.), a non-model crop

How do roots respond to osmotic stress? A transcriptomic approach to address this question in a non-model crop

Descubre y comparte nuestro conocimiento público

Resultados de búsqueda

Transcriptomic profiling in Musa: a look into processes affected by mild osmotic stress in the root tip

Effect of paleopolyploidy and allopolyploidy on gene expression in banana

[U19ArtCenciEffectInthomNodev.pdf]

Differential root transcriptomics in a polyploid non-model crop: the importance of respiration during osmotic stress

[U16ArtZorrillafontanesiDifferentialInthomNodev.pdf]

Identification of drought responsive genes and promoters in Musa by using RNA-seq

[Poster CostWG2_JZ.PDF]

Combined phenotypic and transcriptomic approaches to evaluate drought-stress response in banana (Musa spp.), a non-model crop

[Poster COSTGenMeeting_JZ2.pdf]

How do roots respond to osmotic stress? A transcriptomic approach to address this question in a non-model crop

[Poster_EPSOMeeting_JZ.PDF]