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The complete genome of an Australian isolate of zantedeschia mild mosaic virus (ZaMMV) causing mosaic symptoms on Alocasia sp. (designated ZaMMV-AU) was cloned and sequenced. The genome comprises 9942 nucleotides (excluding the poly-A tail) and encodes a polyprotein of 3167 amino acids. The seque...


Kidanemariam, D.B.Abraham, A.D.Sukal, A.C.Holton, T.A.Dale, J.L.James, A.P.Harding, R.M.[Complete genome sequence of a novel zantedeschia mild mosaic virus isolate: The first report from Australia and from Alocasia sp.]Complete genome sequence of a novel zantedeschia mild mosaic virus isolate: The first report from Australia and from Alocasia sp.

Potato (Solanum tuberosum L.) is an important staple crop with a highly heterozygous and complex genome. Despite its cultural and economic significance, potato improvement efforts have been held back by the relative lack of genetic resources available to producers and breeders. The publication of...


Gálvez, J.H.Tai, H.H.Barkley, N.A.Gardner, K.Ellis, D.Stromvik, M.V.[Understanding potato with the help of genomics.]Understanding potato with the help of genomics.

The discipline of genomics is setting new paradigms in research approaches to resolving problems in human and animal health. We propose to determine the genome sequence of Theileria parva, a pathogen of cattle, using the random shotgun approach pioneered at The Institute for Genomic Research (TIG...


Nene, VishvanathBishop, Richard P.Morzaria, S.P.Gardner, M.J.Sugimoto, C.Ole-MoiYoi, O.K.Fraser, C.M.Irvin, A.[Theileria parva genomics reveals an atypical apicomplexan genome]Theileria parva genomics reveals an atypical apicomplexan genome

This paper raises some issues on how genetics and genomics research at the International Livestock Research Institute (ILRI) can play a role in assisting livestock development in the region. Fundamentals of livestock production is outlined and the ILRI genetics and genomics research programme is ...


Gibson, John P.[Possible roles for ILRI genetics and genomics research]Possible roles for ILRI genetics and genomics research

The genome locations of the wound-response genes that were expressedduring the post-harvest physiological deterioration (PPD) of cassava, suchas phenylalanine ammonia lyase, ?-1.3 glucanase, hydroxyprolinerich glycoprotein, catalase, 1-aminocyclopropane 1-carboxylate, cysteineprotease inhibitor, ...


Cortés Bermúdez, D.F.Reilly, KOkogbenin, EmmanuelBeeching, JRIglesias, C.A.Tohme, Joseph M.[Mapping wound-response genes involved in post-harvest physiological deterioration (PPD) of cassava (Manihot esculenta Crantz)]Mapping wound-response genes involved in post-harvest physiological deterioration (PPD) of cassava (Manihot esculenta Crantz)

The recombination and copy number shifting activities of the plant mitochondrial genome are widely documented across plant genera, but these genome processes have not been as well examined with regard to their roles in plant evolution. Because of the extensive plant collections of Phaseolus spp a...


Arrieta Montiel, MPLyznik, AWoloszynska, MJanska, HTohme, Joseph M.Mackenzie, S[Tracing evolutionary and developmental implications of mitochondrial stoichiometric shifting in the common bean]Tracing evolutionary and developmental implications of mitochondrial stoichiometric shifting in the common bean

Traditional breeding efforts are expected to be greatly enhanced through collaborative approaches incorporating functional, comparative and structural genomics. Potential benefits of combining genomic tools with traditional breeding have been a source of widespread interest and resulted in numero...


Ishitani, ManabuRao, Idupulapati M.Wenzl, PeterBeebe, Stephen E.Tohme, Joseph M.[Integration of genomics approach with traditional breeding towards improving abiotic stress adaptation: Drought and aluminum toxicity as case studies]Integration of genomics approach with traditional breeding towards improving abiotic stress adaptation: Drought and aluminum toxicity as case studies

Breeding goals of yield increases, root quality improvement, and disease resistance in cassava are considerably slowed down by biological characteristics of the crop, which includes a long growth cycle, a heterozygous genetic background and a poor knowledge of the organization of crop diversity. ...


Fregene, Martin A.Okogbenin, EmmanuelMba, CAngel, F.Suarez, MCGutiérrez A., Janeth PatriciaChavarriaga Aguirre, PaulRoca, William M.Bonierbale, Merideth W.Tohme, Joseph M.[Genome mapping in cassava improvement: Challenges, achievements and opportunities]Genome mapping in cassava improvement: Challenges, achievements and opportunities

Xanthomonas oryzae pathovar oryzae (Xoo) and X. oryzae pv. oryzicola (Xoc) cause bacterial diseases in rice: leaf blight and leaf streak, respectively. Although both the Asian and the African strains of Xoo induce similar symptoms, they are genetically different, with the African Xoo strains bein...


Soto Suárez, M.González, C.Piegu, BTohme, Joseph M.Verdier, Valérie[Genomic comparison between Xanthomonas oryzae pv.oryzae and Xanthomonas oryzae pv.oryzicola,usingsuppression-subtractive hybridization]Genomic comparison between Xanthomonas oryzae pv.oryzae and Xanthomonas oryzae pv.oryzicola,usingsuppression-subtractive hybridization

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