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Journal Article 2016

Autor: Pulido Tamayo, Sergio Duitama, Jorge Marchal, Kathleen

Identification of genomic regions associated with a phenotype of interest is a fundamental step toward solving questions in biology and improving industrial research. Bulk segregant analysis (BSA) combined with high-throughput sequencing is a technique to efficiently identify these genomic region...

Enlace original: https://cgspace.cgiar.org/handle/10568/73215

Investigación en Agricultura
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Pulido Tamayo, Sergio ,  Duitama, Jorge ,  Marchal, Kathleen ,  [EXPLoRA-web: linkage analysis of quantitative trait loci using bulk segregant analysis] ,  EXPLoRA-web: linkage analysis of quantitative trait loci using bulk segregant analysis
Journal Article 2016

Autor: Sempere, Guilhem Philippe, Florian Dereeper, Alexis Ruiz, Manuel Sarah, Gautier Larmande, Pierre

BACKGROUND: Exploring the structure of genomes and analyzing their evolution is essential to understanding the ecological adaptation of organisms. However, with the large amounts of data being produced by next-generation sequencing, computational challenges arise in terms of storage, search, shar...

Enlace original: https://cgspace.cgiar.org/handle/10568/75712

Investigación en Agricultura
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Sempere, Guilhem ,  Philippe, Florian ,  Dereeper, Alexis ,  Ruiz, Manuel ,  Sarah, Gautier ,  Larmande, Pierre ,  [Gigwa—Genotype investigator for genomewide analyses] ,  Gigwa—Genotype investigator for genomewide analyses
Journal Article 2016-08-31

Autor: Perea, Claudia Hoz, Juan Fernando de la Cruz, Daniel Felipe Lobaton, Juan David Izquierdo, Paulo Quintero, Juan Camilo Raatz, Bodo Duitama, Jorge

Background Therecent development and availability of different genotype by sequencing (GBS) protocols provided a cost-effective approach to perform high-resolution genomic analysis of entire populations in different species. The central component of all these protocols is the digestion of the ini...

Enlace original: https://cgspace.cgiar.org/handle/10568/76973

Investigación en Agricultura
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Perea, Claudia ,  Hoz, Juan Fernando de la ,  Cruz, Daniel Felipe ,  Lobaton, Juan David ,  Izquierdo, Paulo ,  Quintero, Juan Camilo ,  Raatz, Bodo ,  Duitama, Jorge ,  [Bioinformatic analysis of genotype by sequencing (GBS) data with NGSEP] ,  Bioinformatic analysis of genotype by sequencing (GBS) data with NGSEP
Journal Article 2014-04-15

Autor: Bojacá, Carlos Ricardo Wyckhuys, Kris A.G. Schrevens, Eddie
Enlace original: https://cgspace.cgiar.org/handle/10568/42302

Investigación en Agricultura
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Bojacá, Carlos Ricardo ,  Wyckhuys, Kris A.G. ,  Schrevens, Eddie ,  [Life cycle assessment of Colombian greenhouse tomato production based on farmer-level survey data] ,  Life cycle assessment of Colombian greenhouse tomato production based on farmer-level survey data
Journal Article 2015

Autor: Dereeper, Alexis Homa, Felix Andres, Gwendoline Sempere, Guilhem Sarah, Gautier Hueber, Yann Dufayard, Jean-François Ruiz, Manuel
Enlace original: https://cgspace.cgiar.org/handle/10568/67422

Investigación en Agricultura
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Dereeper, Alexis ,  Homa, Felix ,  Andres, Gwendoline ,  Sempere, Guilhem ,  Sarah, Gautier ,  Hueber, Yann ,  Dufayard, Jean-François ,  Ruiz, Manuel ,  [SNiPlay3: a web-based application for exploration and large scale analyses of genomic variations] ,  SNiPlay3: a web-based application for exploration and large scale analyses of genomic variations
Journal Article 2016-05

Autor: Mwongera, Caroline Shikuku, K.M. Twyman, Jennifer Läderach, Peter Ampaire, Edidah L. Asten, Piet J.A. van Twomlow, Stephen Winowiecki, Leigh A.

Approaches that aim to identify and prioritize locally appropriate climate smart agriculture (CSA) technologies will need to address the context-specific multi-dimensional complexity in agricultural systems. The climate smart agriculture rapid appraisal (CSA-RA) is a mixed method approach that dr...

Enlace original: https://cgspace.cgiar.org/handle/10568/75715

Investigación en Agricultura
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Mwongera, Caroline ,  Shikuku, K.M. ,  Twyman, Jennifer ,  Läderach, Peter ,  Ampaire, Edidah L. ,  Asten, Piet J.A. van ,  Twomlow, Stephen ,  Winowiecki, Leigh A. ,  [Climate smart agriculture rapid appraisal (CSA-RA): A tool for prioritizing context-specific climate smart agriculture technologies] ,  Climate smart agriculture rapid appraisal (CSA-RA): A tool for prioritizing context-specific climate smart agriculture technologies
Journal Article 2014-01-29

Autor: Khoury, Colin K. Bjorkman, Anne D. Dempewolf, Hannes Ramírez Villegas, Julián Guarino, Luigi Jarvis, Andy Rieseberg, Loren H. Struik, Paul C.

The narrowing of diversity in crop species contributing to the world’s food supplies has been considered a potential threat to food security. However, changes in this diversity have not been quantified globally. We assess trends over the past 50 y in the richness, abundance, and composition of cr...

Enlace original: https://cgspace.cgiar.org/handle/10568/42297

Investigación en Agricultura
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Khoury, Colin K. ,  Bjorkman, Anne D. ,  Dempewolf, Hannes ,  Ramírez Villegas, Julián ,  Guarino, Luigi ,  Jarvis, Andy ,  Rieseberg, Loren H. ,  Struik, Paul C. ,  [Increasing homogeneity in global food supplies and the implications for food security] ,  Increasing homogeneity in global food supplies and the implications for food security

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