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An interspecific cross (BC 1) involving a species with one of the largest genomes in the Coffea genus [Coffea heterocalyx (HET), qDNA = 1.74 pg] and a species with a medium-sized genome [Coffea canephora (CAN), qDNA = 1.43 pg] was studied using two types of molecular markers, AFLP and SSR. One hu...


Coulibaly, IRevol, BNoirot, MPoncet, VLorieux, MCarasco-Lacombe, CMinier, JDufour, MHamon, P[AFLP and SSR polymorphism in a coffea interspecific backcross progeny [(C. heterocalyx x C. canephora) x C. canephora]]AFLP and SSR polymorphism in a coffea interspecific backcross progeny [(C. heterocalyx x C. canephora) x C. canephora]
Hernández Hernández, Eric M.Fernández Medina, Rita DanielaNavarro-Escalante, LucioNuñez, JonathanBenavides Machado, PabloCarareto, Claudia M. A.[Genome-wide analysis of transposable elements in the coffee berry borer Hypothenemus hampei (Coleoptera: Curculionidae): description of novel families]Genome-wide analysis of transposable elements in the coffee berry borer Hypothenemus hampei (Coleoptera: Curculionidae): description of novel families

Banana cultivars (Musa ssp.) are diploid, triploid and tetraploid hybrids derived from Musa acuminata and Musa balbisiana. We presented a high-quality draft genome assembly of M. balbisiana with 430 Mb (87%) assembled into 11 chromosomes. We identified that the recent divergence of M. acuminata (...


Zhang, J.Li, J.Xu, Y.Wang, J.Ma, W.Wu, Z.Yu, L.Yang, Y.Liu, C.Guo, Y.Sun, S.Baurens, F.C.Martin, G.Salmon, F.Garsmeur, O.Yahiaoui, N.Hervouet, C.Rouard, M.Laboureau, N.Habas, R.Ricci, S.Peng, M.Guo, A.Xie, J.Li, Y.Ding, Z.Yan, Y.Tie, W.D’Hont, A.Hu, W.Jin, Z.[Musa balbisiana genome reveals subgenome evolution and functional divergence]Musa balbisiana genome reveals subgenome evolution and functional divergence

Using the technique of random amplified polymorphic DNA (RAPD), we have identified 116 amplification products in Musa germplasm using nine primers. This has enabled us to identify RAPD markers that are specific to each of nine genotypes of Musa representing AA, AAA, AAB, ABB, and BB genomes. The ...


Howell, E.C.Newbury, H.J.Swennen, R.L.Withers, L.A.Ford-Lloyd, B.V.[The use of RAPD for identifying and classifying Musa germplasm]The use of RAPD for identifying and classifying Musa germplasm

The Ethiopian plateau hosts thousands of durum wheat (Triticum turgidum subsp. durum) farmer varieties (FV) with high adaptability and breeding potential. To harness their unique allelic diversity, we produced a large nested association mapping (NAM) population intercrossing fifty Ethiopian FVs w...


Kidane, Y.G.Gesesse, C.A.Hailemariam, B.N.Desta, E.A.Mengistu, D.K.Fadda, CarloPe, M.E.Dell'Acqua, M.[A large nested association mapping population for breeding and quantitative trait locus mapping in Ethiopian durum wheat]A large nested association mapping population for breeding and quantitative trait locus mapping in Ethiopian durum wheat

Genetic diversity and relationships were assessed in 28 accessions of Musa acuminata (AA) Colla and Musa balbisiana (BB) Colla, and some of their natural hybrids, using the amplified fragment length poly-morphisms (AFLP) technique. Fifteen AFLP +3 primer pairs produced 527 polymorphic bands among...


Ude, G.Pillay, M.Nwakanma, D.Tenkouano, A.[Genetic diversity in Musa acuminata Colla and Musa balbisiana Colla and some of their natural hybrids using AFLP markers]Genetic diversity in Musa acuminata Colla and Musa balbisiana Colla and some of their natural hybrids using AFLP markers
Mrode, Raphael A.Ojango, Julie M.K.Okeyo Mwai, AllyMwacharo, Joram M.[Genomic selection and use of molecular tools in breeding programs for indigenous and crossbred cattle in developing countries: Current status and future prospects]Genomic selection and use of molecular tools in breeding programs for indigenous and crossbred cattle in developing countries: Current status and future prospects
Edea, Z.Dadi, H.Dessie, TadelleKwan Suk Kim[Genomic signatures of high altitude adaptation in Ethiopian sheep populations]Genomic signatures of high altitude adaptation in Ethiopian sheep populations

We describe here the complete genome of Rice hoja blanca tenuivirus. The sequenced isolate was obtained by insect vector transmission from a symptomatic rice sample grown in Colombia. Sequence data from the four RNA components were obtained by deep sequencing (Illumina), and infections were confi...


Jiménez Polo, JenyferCarvajal-Yepes, MonicaLeiva, Ana MariaCruz Gallego, MaribelRomero, Luz ElenaBolaños, Carmen A.Lozano, IvanCuéllar, Wilmer J.[Complete Genome Sequence of Rice hoja blanca tenuivirus Isolated from a Susceptible Rice Cultivar in Colombia]Complete Genome Sequence of Rice hoja blanca tenuivirus Isolated from a Susceptible Rice Cultivar in Colombia

Droc, GaëtanLariviere, D.Guignon, V.Yahiaoui, N.This, D.Garsmeur, O.Dereeper, A.Hamelin, C.Argout, X.Dufayard, Jean-FrançoisLengelle, J.Baurens, F.C.Cenci, A.Pitollat, B.D'Hont, A.Ruiz, M.Rouard, M.Bocs, S.[The Banana Genome Hub]The Banana Genome Hub

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