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The human genome project has been recently complemented by whole-genome assessment sequence of 32 mammals and 24 nonmammalian vertebrate species suitable for comparative genomic analyses. Here we anticipate a precipitous drop in costs and increase in sequencing efficiency, with concomitant develo...


Genome 10K community of scientists[Genome 10K: a proposal to obtain whole-genome sequence for 10 000 vertebrate species]Genome 10K: a proposal to obtain whole-genome sequence for 10 000 vertebrate species

An alignment of 17 complete mitochondrial DNA (mtDNA) sequences of chickens and jungle fowls revealed a perfect mono-nucleotide microsatellite repeat unit consisting of between 8 and 13 Cs within the 16S rRNA gene in nine samples. However, the remaining eight sequences had three kinds of interrup...


Shengguo, Z.Hanotte, Olivier H.Han Jianlin[Identification and characterization of a perfect mono-nucleotide microsatellite within 16S rRNA gene in chicken mtDNA genome]Identification and characterization of a perfect mono-nucleotide microsatellite within 16S rRNA gene in chicken mtDNA genome

Genomic selection (GS) involves estimating breeding values using molecular markers spanning the entire genome. Accurate prediction of genomic breeding values (GEBVs) presents a central challenge to contemporary plant and animal breeders. The existence of a wide array of marker-based approaches fo...


Ogutu, Joseph O.Piepho, Hans-PeterSchulz-Streeck, T.[A comparison of random forests, boosting and support vector machines for genomic selection]A comparison of random forests, boosting and support vector machines for genomic selection

The retinoids (vitamin A and its derivatives) play a critical role in vision, growth, reproduction, cell differentiation and embryonic development. Using the IMpRH panel, porcine cellular retinol binding protein genes 5 and 7 (RBP5 and RBP7) were assigned to porcine chromosomes 5 and 6, respectiv...


Gong, W.H.Tang, Z.LYang, S.L.Wang, H.Li, Y.Wang, Z.G.Li, K.Han Jianlin[Mapping, tissue distribution and polymorphism of porcine retinol binding protein genes (RBP5 and RBP7)]Mapping, tissue distribution and polymorphism of porcine retinol binding protein genes (RBP5 and RBP7)

World agriculture is based on a small number of animal species and a decreasing number of breeds within each species. Several breeds of West African shorthorn cattle (Bos taurus brachyceros) are now at high risk of extinction due to interbreeding. The West African shorthorn breeds are particularl...


Jabbar, M.A.Diedhiou, M.L.[Does breed matter to cattle farmers and buyers? Evidence from West Africa]Does breed matter to cattle farmers and buyers? Evidence from West Africa

Genetic variability of 18 microsatellites in five Chinese goat breeds was characterized and then individual-breed assignments were implemented on the basis of microsatellite multi-genotypes. Although the low Gst value of 5.7% occurred among these breeds, the accumulated non-parental exclusion pro...


Fan, B.Chen, S.L.Mburu, D.N.Hanotte, Olivier H.Chen, Q.K.Zhao, S.K.Li, K.Han Jianlin[Individual-breed assignments in caprine populations using microsatellite DNA analysis]Individual-breed assignments in caprine populations using microsatellite DNA analysis
Kemp, Stephen J.Teale, A.J.[Random amplified DNA polymorphisms (RAPDs) and pooled DNA in bovine genetic studies]Random amplified DNA polymorphisms (RAPDs) and pooled DNA in bovine genetic studies
Schmidt, A.Schultze-Kraft, RainerLascano, Carlos E.Maass, Brigitte L.[The importance of cafteria trials in genotype selection of the pasture legume Desmodium heterocarpon subsp. ovalifolium]The importance of cafteria trials in genotype selection of the pasture legume Desmodium heterocarpon subsp. ovalifolium

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